Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3538 ATGAATGTGTTCCCAAAGGGGGAAGTCGTTGAAAGTGGTGAAGGCGGGCGGAGTGTGTGGGTCGTGGAGGCTGTCGGTGGTGGAATCAGCAGAGACCTTAAGGCAGCGGAGAGAAGGGGAAGGTGGGTGCAGAGACTTGCTCTTCTTGGAGGGTTGCAGAAAACAGAGCTCAAAATGGAATCAAAAGATGGTTTTCACCTACAGAgtattgaaattcaagaagATGATTCTTTGTCCTTGAGACATTATAATTTTCAAATGGAAGAGAAATCCGGAAAATGCAATCTGTGTGCTACACGGTGTTTATCATGTCCGCATTTTGAACAAGTGGCATCAATAGCGGGTTTGGGGACTAGTAACTTTACCAATGAAGCCTCTAAAGAGAAGAAATCCAGTCATTGCTCTTCGAACGATGGCATTCTGTTCTCTCATTCATTGAATAGTGTGTACGATTGTAGGCAGCACACAAGCAGTGAGGCAAGTAACATCTTCAGTGTCTCTTCGTGTCCTGAATCATTCTCTGAAATTGCAGAAAGTCGAGCTACTGTTAGGGTTTCTGATCCTTGTGAAGACACAGAGTTGCTTTTAGACATCAGAAATGCCCAACCTGCTGGAGAATCTAGATCTCGTGACTCTCCCAAAGatttgattaaatttgatatcgaAAGATTCTCAAATCAAATTGAGAAGCATAAAGAATTAGATACCCCGGTAGATAATGTCTCTTGCATCAGCAGATCAGACAGCGCATATTTGAGAATAGCTGATACTCATTTTGACAGAGCCGATAACAATCACTGTGATTTTCTAAATTTTACCAAAAAGCATCCACAAGAAGGAGTAGTTTATCCAAACTTCATTGATTGTACTATCTCACCAAAGGGAGAGCCTTCTGAGTGCTCAGGTGAAAAGGTGGAGTCATTGCCAGCAAGAGTAGCCATGTCTGGGATTAGTCAGATAGATGGTGTTTACAACTATCATACATTTAATACTGATAATATTCATTTGAATTGTAAACATTTAGATGCTGGAATGGAAAATCATTTGAACTGCGGGGGGCGTATCTTTGAGCCTCCTGTGATTGATGCTGCAAATCTCTTTATTTCATGGTATTCGGtggatttcattttatttttaacctaTAGTTTTGTTCCCGGCATAGAACCACAAACATACAACTTTTCAATCAAGAACACTTGCATCTTCAACTGCAATATTTCTGCAGCTTCCTTCCAACTCCCCTTTGACCTGTATTACTTTCAACTGCAATATATGGGATATGCTGGCGTCATCAATGAAATTAAAAGTCCTGAATTACATTGTATTATTGTTAGAGTTTGCGATATCTGTGGGGATGTAGGGCGTGAGGAGTTACTTGCAATTTGCAGCAAGTGTACTGATGGAGCAGAACACATTTATTGTATGCGCATAATACGAGACAAAGTTCCTGAAGGTGACTGGGCATGTGAAGAGTGCAGTCTGAAGATAGACACTGATAAACCAGTGCAAGATAAAGTTGAAGAGACAGCTAGAATATCAATAGGATCTCTAGAGTGCCAAAAATCTGGAAGTTCATTAAATATTGAATCTAGGAGtggttcaaaattcaaatctaGATCTTCAGGTGTAGGGAGCACTAGAACAGATGATGTCAGTTCAACATTTCGGTTCTCAGCTAAGAGACAAGGAACCCCTTTAAAAGCTCAGTCTGCAAAAGAAGCAAGGACTACTGAAATGAATTCTGTGCACCTGAGGTCATCCAAACCCTGCCACAACTCTCCATCTGATAGGGACACCTCATTTAAGAACTTAAAGAAGGTGGAAATGAAAGCAACCAAAGAAATTAATTCTGAGCTCCAATCATTTTCTAATCTGCAGGATAAAGCAAAGGTTCCTAGTGCTTTTGGTGATAAGAGACATGTGGGAACCTTAAAGGCAGAGTTAGGTGAAAAAAGAAAGGATCATGAACTAAAAGTTATATCCCCTACAGCGTCCAACAAAATCAACAACGCTTTACTTCATGGGGATACCACATTCAAGAGATTAAAGAAGGGGGAAATGGAAGCATCCAAAGAAATTACTTCTGAGCTCCTGATATCTAGCAATGATCAAAAGAAATCAAAGGTTCATAGTGCTTGTGGTGATAAGAGGCATGTGCAAACCTTAAATGTtgagttaaataaaaaaagaagggaTCTCGAAGCAAAAGTTATATCCCCCAAAGCTTCCAACACCTTCAACAACTCTCTACTTCATAGGAACACCTCATTCAAGAACTTAAAGAAGGTGGAAAAGAAAGCATCCAAAGAAATTGCTTCTGTGGTCCAAATTTCTTGCAATCCTGGGAACATTAAGGTTCCTGGTGCTTTTGGTGATAAGAGACATGTGGAAACCTTCAAGGCAGACTTAAGAAGGGAGCCTCCATCTAATCTGGGGAAGCCGCAAAGAGAGGCCGCCCTCAGTGTTTCTTCACTAAAGCATTCTTCCTATAGTACTCCGGAGAAATCGGAGTTACCCTCTATATTAGGTGATAAATCACCAAAATTGTGCTCAAAAACTGAGATATCGCAGTACAAATGTGTCCAATTGAATTCAAAATCATCGAATGATGCAGGTTTGAAACTAAAAGGACAGCTGGCAAAGGGCTCACTGTTAAAGTCAAGGTCATACAATGCAGAAGATTTGAAGTCGAAAGGACAGCTGGCAAAAGGTGATTCTTCAGAAAAGCAAATGGTTGCAAGAAAGTCAGATAATAAAAAGCAAGCAGATACGAGAGTGTTGTCTAAATCTCTGTCATTTAACAGTGTTATCTCTGATAAAGTAAATGCTACCTGTTCTGAGGTTCGCGTTGAAAATGCTGATTGTCTTGAGGGCTTGAAGAAGTTAAACCGTGAAAAAGAAATAGAGACGATTAAAGGGAAAAATATGTCTGAGTTACATAGCCCTGCAATGTGCTCTCCGTCTTGCGATGACGTATTCATTTCAGAATCAAACTGTCATAAACTTGATTCTGTTCGAAGTTGTGGATTATCACATAATAGTTCAAAAGCAAGCAGCAGCATCGCTAATAATTTAGCTCTTGATGAAGAGTCCTGCCAGAGAAACTTGCCCCAGTTTGAGGctgcaattttttttcatagttctaCCATTCCTGAGCCCAACTACAAATGGCTAGGCAAATTTCAGTTGCACACTGGTGAGGGTCTTGCTAGCGTATGTGGTGGAGTCCAACCGCTCGTATCAACTTCTGCATCACCTAGAGTTCTTGAACTAGCGTACAAGCTTCCTGAGATTATCATACTGGAGGCATTACCTCGCTTGGAGACATGGCCATCTCAATTTATAAAACATCGAGCCACAGAAGAAAATATTGCTTTCTACTTTTTTGCGACAGATCTTGATAGAACATTGTTGGAATGCATGACAAAGTATGATTTGGCTTTGAGAGGAAATTTGGATGGTTTTGAACTATTGATTTTTCCATCCAACCTTCTGCCTGAAAAATGCCAGCGTTGGAATAAGATTTTATTCTTATGGGGTGTATTCAGAGGACGGAAGGAAAAGAATAGTGACAATGAAAAAAGGCCTGCATTTGATCTCAATGCTTATCCTCAAGATCGAGAAGATACAGAAGGAGTTGCTGAAGGTGGCGAATGCTTGAGTGTTACTGATTCCCTCGGTGACATTCATAAATTTGACAGTACAGGTACAAGGTCTTCAGGAGACGTAGTTTTGCTTGAAGGAGATGGTTCTGGTTTCACTGATGCGGGCCAATCACTTGACAAAGGAGGGAACAAGTCACAGGTTGTAGATCTTAATCTTTCAGTGTGGCCTCAAAGTGCTACGCATGAAGGTGGTCTTTGGCTCTCAACTGCCATTGCAGACAATGGAAGTATTGAAGAGATGCATCATGGCAAGCCAAGGATGGAGGATGGTGAGGCGTCCGTGTCAGGATCCcatgagaaaattttggaaGCTGCAAATACTTTGGTTTCCCTCAGAGAGGGCGTCAGAAATATATAG 4023 0.3987 MNVFPKGEVVESGEGGRSVWVVEAVGGGISRDLKAAERRGRWVQRLALLGGLQKTELKMESKDGFHLQSIEIQEDDSLSLRHYNFQMEEKSGKCNLCATRCLSCPHFEQVASIAGLGTSNFTNEASKEKKSSHCSSNDGILFSHSLNSVYDCRQHTSSEASNIFSVSSCPESFSEIAESRATVRVSDPCEDTELLLDIRNAQPAGESRSRDSPKDLIKFDIERFSNQIEKHKELDTPVDNVSCISRSDSAYLRIADTHFDRADNNHCDFLNFTKKHPQEGVVYPNFIDCTISPKGEPSECSGEKVESLPARVAMSGISQIDGVYNYHTFNTDNIHLNCKHLDAGMENHLNCGGRIFEPPVIDAANLFISWYSVDFILFLTYSFVPGIEPQTYNFSIKNTCIFNCNISAASFQLPFDLYYFQLQYMGYAGVINEIKSPELHCIIVRVCDICGDVGREELLAICSKCTDGAEHIYCMRIIRDKVPEGDWACEECSLKIDTDKPVQDKVEETARISIGSLECQKSGSSLNIESRSGSKFKSRSSGVGSTRTDDVSSTFRFSAKRQGTPLKAQSAKEARTTEMNSVHLRSSKPCHNSPSDRDTSFKNLKKVEMKATKEINSELQSFSNLQDKAKVPSAFGDKRHVGTLKAELGEKRKDHELKVISPTASNKINNALLHGDTTFKRLKKGEMEASKEITSELLISSNDQKKSKVHSACGDKRHVQTLNVELNKKRRDLEAKVISPKASNTFNNSLLHRNTSFKNLKKVEKKASKEIASVVQISCNPGNIKVPGAFGDKRHVETFKADLRREPPSNLGKPQREAALSVSSLKHSSYSTPEKSELPSILGDKSPKLCSKTEISQYKCVQLNSKSSNDAGLKLKGQLAKGSLLKSRSYNAEDLKSKGQLAKGDSSEKQMVARKSDNKKQADTRVLSKSLSFNSVISDKVNATCSEVRVENADCLEGLKKLNREKEIETIKGKNMSELHSPAMCSPSCDDVFISESNCHKLDSVRSCGLSHNSSKASSSIANNLALDEESCQRNLPQFEAAIFFHSSTIPEPNYKWLGKFQLHTGEGLASVCGGVQPLVSTSASPRVLELAYKLPEIIILEALPRLETWPSQFIKHRATEENIAFYFFATDLDRTLLECMTKYDLALRGNLDGFELLIFPSNLLPEKCQRWNKILFLWGVFRGRKEKNSDNEKRPAFDLNAYPQDREDTEGVAEGGECLSVTDSLGDIHKFDSTGTRSSGDVVLLEGDGSGFTDAGQSLDKGGNKSQVVDLNLSVWPQSATHEGGLWLSTAIADNGSIEEMHHGKPRMEDGEASVSGSHEKILEAANTLVSLREGVRNI 1340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3538 1340 SMART PHD_3 446 493 IPR001965 -
Sto6g3538 1340 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 397 508 IPR013083 -
Sto6g3538 1340 SUPERFAMILY FYVE/PHD zinc finger 433 496 IPR011011 -
Sto6g3538 1340 MobiDBLite consensus disorder prediction 524 599 - -
Sto6g3538 1340 MobiDBLite consensus disorder prediction 895 924 - -
Sto6g3538 1340 MobiDBLite consensus disorder prediction 898 924 - -
Sto6g3538 1340 PANTHER - 83 260 - -
Sto6g3538 1340 PANTHER - 444 623 - -
Sto6g3538 1340 PANTHER - 826 1191 - -
Sto6g3538 1340 PANTHER - 826 1191 - -
Sto6g3538 1340 PANTHER - 83 260 - -
Sto6g3538 1340 PANTHER - 444 623 - -
Sto6g3538 1340 MobiDBLite consensus disorder prediction 524 597 - -
Sto6g3538 1340 MobiDBLite consensus disorder prediction 821 836 - -
Sto6g3538 1340 Coils Coil 716 736 - -
Sto6g3538 1340 MobiDBLite consensus disorder prediction 802 843 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3538 Sto-Chr6 40880690 40892706 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3538 - - cam:101505946 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3538 6 40880690 40892706 Sto6g3538 6 40880690 40892706 ECH