Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3493 ATGGCCACCATGGAGAGCTTGATCGGCCTCGTCAATCGAATTCAGAGAGCCTGTACGGTTCTTGGCGACTATGGAGGTGACTCTGCTTTGCCTACTCTTTGGGAGGCTCTTCCCTCTGTCGCCGTCGTCGGCGGCCAGAGTTCTGGAAAGTCATCGGTACTTGAAAGCATTGTCGGCCGTGATTTTCTGCCCCGGGGATCAGGGATTGTCACGCGGAGGCCTTTAGTCCTGCAGCTGCACAAGATAGAAGAGGGGCTACAGGAGTATGCAGAATTCCTTCATTTGCCGAAGAAGAAACTCACTGATTTCTCTATGGTTCGAAAGGAAATCCAAGATGAAACTGATAGAATGACAGGGAAGTCAAAACAGATATCTCCCGTTCCTATTAATCTCAGTATCTACTCCCCAAACGGCTTATCTGATAATCATCCTTTCTTTTTTGTAGTTGTTAATTTAACATTGATAGATCTGCCCGGTTTGACCAAGGTTGCTGTAGAGGGACAGCCAGAAAGTATTGTTCAAGACATTGACAACATGGTTCGCTCATATGTAGATAAGCCTAATTGCTTAATTCTGGCAATAACTCCTGCAAATCAGGACATAGCAACATCAGATGCCATTAAGATCGCTAGAGAAGTTGATCCTACGGGTGAGAAAACATATGGTGTTTTGACAAAGCTTGATTTGATGGACAAAGGAACAAATGCTTTGGAGGTTCTTGAGGGAAGATCATATCGACTTCAACACCCGTGGGTGGGAATCGTAAATCGTTCACAGGCAGATATTAATAAGAATGTTGATATGATTGCTTCTCGGCAGCGGGAGCGTGAATTTTTTGCCTGCAGTCCTGATTATGGACACTTGGCTAGCCAAATGGGCTCAGAGTATCTAGCAAAGCTTCTCTCAAAGCATTTAGAGTCTGTGATAAGAGCCCGGCTTCCTGGAATAGCATCTTTAATCAATAGAAGCATTGATGAACTTGAAGCAGAGTTGGGCCACCTAGGTAGACCCGTTGCTGTTGACTCTGGGGCTCAGCTGTACACAATTCTAGAATTATGCCGTGCATTTGACAGAGTATTTAAGGAGCATTTAGATGGAGGGCGACCTGGCGGTGATCGAATTTATGGAGTTTTTGATCACCAGCTTCCGGCTGCGTTGAGAAAGCTTCCATTTGACCGTCATCTATCGTTGCAAAATGTAAGAAAGGTGATTTCAGAGGCAGATGGTTACCAACCTCATCTAATCGCACCCGAACAAGGTTATCGACGCCTCATTGATAGTTCACTTAATTATTTCAAGGGTCCAGCTGAAGCTTCGGTGGATGCTATTCACTTCATACTAAAGGAACTCGTGAGAAGGTCAATTGGAGAAACGCAGGAGCTGAAGCGCTTTCCAACTCTTAGAGCAGAAATAGCAGGAGCTGCTAATGAAGCATTGGAGAGGTTCCGTGAAGAGAGTAAGAAGACAACCTTACGACTGGTGGAAATGGAATCTTCATACCTCACGGTTGATTTCTTCCGAAAACTCCCGCAGGAAGTTGACAAGGGAGGGAATCCAACTCTCTTATCCGCCGACCGATACGCTGAGGGACACTTCCGCAGGATAGGTTCAAATGTTTCATCTTATGTCGGGATGGTGTCAGAAACGCTGAGGAATACTATTCCAAAGGCTGTTGTTCATTGTCAAGTGAGGGAGGCTCAGCGAGCCTTACTAGACCACTTTTATGCAAATTTGGGCAAAAAGGAGGGAAAGCAACTTGCGGAGCTGTTGGATGAAGACCCTGCTTTGATGGAAAGGAGGCAGCAATGTTCCAAGAGGCTCGAGTTATATAAGTCTGCTAGGGATGAGATTGATGCAGTTTCATGGTCGAAATGA 1875 0.456 MATMESLIGLVNRIQRACTVLGDYGGDSALPTLWEALPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKIEEGLQEYAEFLHLPKKKLTDFSMVRKEIQDETDRMTGKSKQISPVPINLSIYSPNGLSDNHPFFFVVVNLTLIDLPGLTKVAVEGQPESIVQDIDNMVRSYVDKPNCLILAITPANQDIATSDAIKIAREVDPTGEKTYGVLTKLDLMDKGTNALEVLEGRSYRLQHPWVGIVNRSQADINKNVDMIASRQREREFFACSPDYGHLASQMGSEYLAKLLSKHLESVIRARLPGIASLINRSIDELEAELGHLGRPVAVDSGAQLYTILELCRAFDRVFKEHLDGGRPGGDRIYGVFDHQLPAALRKLPFDRHLSLQNVRKVISEADGYQPHLIAPEQGYRRLIDSSLNYFKGPAEASVDAIHFILKELVRRSIGETQELKRFPTLRAEIAGAANEALERFREESKKTTLRLVEMESSYLTVDFFRKLPQEVDKGGNPTLLSADRYAEGHFRRIGSNVSSYVGMVSETLRNTIPKAVVHCQVREAQRALLDHFYANLGKKEGKQLAELLDEDPALMERRQQCSKRLELYKSARDEIDAVSWSK 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3493 624 SMART dynamin_3 4 265 IPR001401 GO:0003924|GO:0005525
Sto6g3493 624 PRINTS Dynamin signature 37 55 IPR022812 -
Sto6g3493 624 PRINTS Dynamin signature 62 79 IPR022812 -
Sto6g3493 624 PRINTS Dynamin signature 146 163 IPR022812 -
Sto6g3493 624 PRINTS Dynamin signature 196 214 IPR022812 -
Sto6g3493 624 PRINTS Dynamin signature 215 231 IPR022812 -
Sto6g3493 624 PRINTS Dynamin signature 238 257 IPR022812 -
Sto6g3493 624 PANTHER - 3 623 - -
Sto6g3493 624 Pfam Dynamin family 40 226 IPR045063 -
Sto6g3493 624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 321 IPR027417 -
Sto6g3493 624 Pfam Dynamin central region 235 502 IPR000375 -
Sto6g3493 624 Gene3D - 4 323 IPR027417 -
Sto6g3493 624 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 63 72 IPR019762 -
Sto6g3493 624 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 34 314 IPR030381 GO:0005525
Sto6g3493 624 PANTHER DYNAMIN 3 623 IPR022812 -
Sto6g3493 624 CDD DLP_1 37 314 IPR001401 GO:0003924|GO:0005525
Sto6g3493 624 Pfam Dynamin GTPase effector domain 529 620 IPR003130 GO:0003924|GO:0005525
Sto6g3493 624 ProSiteProfiles GED domain profile. 532 624 IPR020850 -
Sto6g3493 624 SMART GED_2 527 620 IPR003130 GO:0003924|GO:0005525
Sto6g3493 624 Gene3D Dynamin, middle domain 341 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3493 Sto-Chr6 40561634 40566099 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3493 - - tcc:18606108 1097.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3493 6 40561634 40566099 Sto6g3493 6 40561634 40566099 ECH