Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3475 ATGGAGGATCTCATCAAGGGCTTGGCCGGCGCTGTTCTCGATCGCCTCGACAATGACCAACACCCCGACTCCCACTCTCGCGATGAACGCTCCAGATCCACTTGGGCTCAGGTTGTGTCCGAAGATCAGGATAATGACCAGGGGGATGATCGTAGTCGCAGACACGGTTACGGTGGGAATAACTGGAATAAAGAGCAACAGTCTCGTCCAGAGCAGGAGGAGTGGGAAGCCGACAGTTCCAGAATTTCGAGCAGGCCTTGTAAGGACAAATATCGTCCAGAGCAGGAGGAGTGGCAAGCCGATAGTTATAAGACTTCGAACAGGCCCGATAAGTTGGACGAAGAAAATGATGATGGATGGCAGACTGTTGGCAAGAAACCTCCAAGAAAGCCACACAAGATCATAAAGGATCGCTGGGATGGTTATAAACTACCTCCTGATGCGCAAGAATACTCTAATGACGTTGAAATTGGTGCTACTCTAGAGCCCTCTGAAGATGAACTTGCTGATCTGTCACAAGCTTGCAATAAACTTTGGGATCTTGATTTAAACCGTTTGGTACCTGGGAAGGATTATGAAATTGATTGTGGTTCAGGGAAAAAGGTTTTTCAAAAGGAAGATATGGCGCAAGGGAGCTTGTTTACTTGGGTTAGTGATGATGTATTCAGAAAGCCTACATTTGCTCGATTTTGTTCACTTTTAGATAACTACAACCCTCATCAAGGACACAAGGAAGTTGTCACATCTGAAGAGAGGCAAGAGCAAGCTGCTTTCATAGAAGAAATCAGTAGGTCAGCACCATTTAAATATCTTCATAAGTATCTTGCATCCAAGGGCATTGCATCTGGAAGCTACCAAGATTTCAAAAGAATGATGAGCAGTTTGTGGTTTGACCTTTATGGCCGAGGTGGTACTTCTGGTTCCTCATCTGCTTTTGAACATGTTTTTGTTGGAGAAGTCAAACAAGATGGAGAAGTTTCTGGCTTTCATAACTGGCTTCAGTTTTACCTTGAAGAAGCAAAAGGGAGGGTTGACTATCAAGGCTACATCTTTCCTCGTCGAAGAGGTGAAATTCCTGACTCAGAAACCCAGCTACTAACTATTCAGTTTGAATGGAATGGTGTTCTGAAATCAGTGTCAAGCACTTTGGTTGGAGTGAGCCCAGAATTCGAACTTGCACTGTATACTCTGTGTTTCTATATGGGTGGGGAGGATAATCACATTCAGCTTGGTCCATATCCAGTTAACATCAAGTGCTATCGATTTGGAGACCGAATCGGATCTGTTTTTCCCATTGCAGATAGTTGA 1308 0.4457 MEDLIKGLAGAVLDRLDNDQHPDSHSRDERSRSTWAQVVSEDQDNDQGDDRSRRHGYGGNNWNKEQQSRPEQEEWEADSSRISSRPCKDKYRPEQEEWQADSYKTSNRPDKLDEENDDGWQTVGKKPPRKPHKIIKDRWDGYKLPPDAQEYSNDVEIGATLEPSEDELADLSQACNKLWDLDLNRLVPGKDYEIDCGSGKKVFQKEDMAQGSLFTWVSDDVFRKPTFARFCSLLDNYNPHQGHKEVVTSEERQEQAAFIEEISRSAPFKYLHKYLASKGIASGSYQDFKRMMSSLWFDLYGRGGTSGSSSAFEHVFVGEVKQDGEVSGFHNWLQFYLEEAKGRVDYQGYIFPRRRGEIPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFYMGGEDNHIQLGPYPVNIKCYRFGDRIGSVFPIADS 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3475 435 ProSiteProfiles Eukaryotic uridylate-specific endoribonuclease (EndoU) domain profile. 167 435 IPR018998 GO:0004521
Sto6g3475 435 SUPERFAMILY EndoU-like 169 433 IPR037227 -
Sto6g3475 435 PANTHER PLACENTAL PROTEIN 11-RELATED 135 434 IPR039787 GO:0004521
Sto6g3475 435 MobiDBLite consensus disorder prediction 1 133 - -
Sto6g3475 435 PANTHER - 135 434 - -
Sto6g3475 435 MobiDBLite consensus disorder prediction 67 125 - -
Sto6g3475 435 MobiDBLite consensus disorder prediction 16 35 - -
Sto6g3475 435 CDD XendoU 167 431 IPR018998 GO:0004521
Sto6g3475 435 Pfam Endoribonuclease XendoU 170 431 IPR018998 GO:0004521
Sto6g3475 435 MobiDBLite consensus disorder prediction 44 58 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3475 K14648 - cit:102619007 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3475 6 40374491 40378160 Sto6g3475 6 40374491 40378160 ECH