Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3459 ATGGCTAATAACAACATGAGAATCTTATCAAGCTATATCCATTCCCTCTCCCAAACTCCTCACAGGCTCAGAAAAAGAATGCTAGCCACTTGGACACCAGACCAGGAGCTAAACCAAGTGAGGCTGAGGTCTGGTTCAGACATGAAGAGGAAGCTGAATTGGTATGATCTTGTGGCTCTTGGAGTAGGAGGAATGCTTGGTGTTGGAGTGTTTGTCACAACTGGTTCTGTGGCCCTCCATCACTCTGGTCCCTCTGTCTTCATATCATATATCATAGCTGGAATTTCAGCCCTTCTTTCCTCTCTGTGTTATACTGAGTTTTCTGTTCAAGTCCCAGTTGCAGGAGGAGCTTTCAGCTACTTGAGATTAACTTTTGGAGAGTTTGTGGGGTATTTTGCTGGGGCAAATATATTGATGGAGTATGTGTTGTCCAACGCAGCGGTAGCGAGGAATTTTACGGAGTATTTGAGCTATGCATTTGGAAAAAATGATCCAAATGTGTGGAGATTACAAGTACATAGGTTGCCAAAGGACTATAACGAGCTGGATTTTCCAGCTGTAGCTATCATTCTTCTTCTTACTCTATGCTTGTGTCATAGTACTAAGGAAAGCTCCATATTGAACTTCATTATGACAATCTTCCATGTCATTTTCTTTGGATTCATCGTTATAGCTGGTTTCTGCAATGGAAGTGCAAAAAACTTGGTTAGTCCAAAAGGGCTAGCTCCTTTTGGTGTTAGAGGTGTCCTTGATGGAGCAGCTATAGTGTACTTCAGTTACATAGGGTATGACTCAGCTTCAACCATGGCTGAGGAGATTAAAAACCCCTCAAGGAGCCTACCTATTGGCATTATTGGTTCAGTTCTTATAACTACAGTGCTGTATTGCCTAATGGCTCTGTCTCTGTGTGTGATGCTTCCTTACAATCATATTTCAGAGAAAGCAACATTTTCAAGGGCTTTCCTTAATATTGGTTGGAAGTGGGCAAGCAACCTTGTTGGAGCAGGTGCTAGTTTGGGTATAATAGCTTCTCTGTTGGTAGCCATGTTAGGACAGGCCAGATACCTTTGTGTTCTTGGAAGGGCTAGGCTGGTTCCATTATGGTTAGCCAAAGTGCACCCATCAACAGGCACCCCATTGAATGCCACACTCTTTTTGGGACTATGCACAGCATCTATTGCTCTCTTCACAGAGCTAAACATAATAGTACAGATGGTAAGCTTAGGCACTCTATTGGTGTTCTACCTGGTGGCCAACGCTCTTCTATACCGCCGCTATGTGATCACTACTCACAACTCACCATTCCCCACTCTCTTTTTCCTCTTTCTCCTCTCTGCCACTTCACTTGGCTTCTCCATTTCTTGGAAGTTGAAACAGCAATGGTGGGTCCTCTCTCTCTTTGTTatcttcatcatcaccatcactgCCTTCTTCCAATACACAGTCCTTCCCCTTCCTCAACCTGATTGGTCTGTCCCATTCATGCCATGGCCTGCTTCCATCTCCATCTTTCTCAACATCTTCCTCATGGCCACTCTCAATCTCCTCTCCTTCCAAAGGTTTGCTATATGGTCATGCCTCATTACTATCTTCTATGTGCTCTATGGGGTTCACTCCACTTATCAAGCAGAGGAGATTGATATGGGTGTGAATGAATTCAACTCTACCACACCCAATTTACAAGCCAAGGTGGAAATGCAAGTGCTTTAG 1710 0.4333 MANNNMRILSSYIHSLSQTPHRLRKRMLATWTPDQELNQVRLRSGSDMKRKLNWYDLVALGVGGMLGVGVFVTTGSVALHHSGPSVFISYIIAGISALLSSLCYTEFSVQVPVAGGAFSYLRLTFGEFVGYFAGANILMEYVLSNAAVARNFTEYLSYAFGKNDPNVWRLQVHRLPKDYNELDFPAVAIILLLTLCLCHSTKESSILNFIMTIFHVIFFGFIVIAGFCNGSAKNLVSPKGLAPFGVRGVLDGAAIVYFSYIGYDSASTMAEEIKNPSRSLPIGIIGSVLITTVLYCLMALSLCVMLPYNHISEKATFSRAFLNIGWKWASNLVGAGASLGIIASLLVAMLGQARYLCVLGRARLVPLWLAKVHPSTGTPLNATLFLGLCTASIALFTELNIIVQMVSLGTLLVFYLVANALLYRRYVITTHNSPFPTLFFLFLLSATSLGFSISWKLKQQWWVLSLFVIFIITITAFFQYTVLPLPQPDWSVPFMPWPASISIFLNIFLMATLNLLSFQRFAIWSCLITIFYVLYGVHSTYQAEEIDMGVNEFNSTTPNLQAKVEMQVL 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3459 569 Gene3D Amino acid/polyamine transporter I 47 483 - -
Sto6g3459 569 PIRSF AA_transporter 38 489 - -
Sto6g3459 569 PIRSF AA_transporter 481 560 - -
Sto6g3459 569 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 9 552 - -
Sto6g3459 569 Pfam C-terminus of AA_permease 490 539 IPR029485 -
Sto6g3459 569 Pfam Amino acid permease 52 426 IPR002293 GO:0016020|GO:0022857|GO:0055085
Sto6g3459 569 PANTHER CATIONIC AMINO ACID TRANSPORTER 7, CHLOROPLASTIC-LIKE 9 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3459 Sto-Chr6 40284019 40288111 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3459 139 544 Organic Solute Cotransporters AT3G10600 50.239 2.28e-143 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3459 - - gmx:100790787 885.174