Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3434 ATGTTTGCTTTCAGGGCATTGTCTCGATCCGTGGGTCGAGAATGCACCGACATTCCCAATCGCAAGCTCTCATGCTTCACCTTCGTACCAACATCTCAGAAAACTGATGCCAATCCATGGCACCCTCACTATCACAGCCGTAGGACTCTCATTCTCGAGCCTTTGGCTTCTGAATACGTCAAGCTTCAAAAGCTCCATGCCTCCGACTCTGGGATTATTGAGGTTAGGTTGGACAggcctgaaaataagaatgctATAGATACTAAATTGATGAGAGGCTTAAAGCATGTGTTAGAATTGATTCATGAGGACTCCTCTGCTAATGTTGCTATTTTCACTAGTTCTGTTCCTGGGGTGTACTGTGCTGGGGCTGATCTGAAGGAACGCAAGACCTTCAGTGTATCTGAGGTTCGGGAATATTCCAAAGTTCTTCGTGCTACATTCTCATATCTAGAGGCTCTTCCTATACCAACTATTGCTGCAATTGAAGGAGCAGCATTGGGTGGTGGACTTGAACTTGCCCTGGCTTGTGATTTTCGCATCTGTGGAGAAGATGCTCTCTTGGGTTTGCCTGAAACAGGACACGCTATAATCCCTGGGGCAGGAGGTACACGAAGATTACCTAGATTGGTAAACAAGGCAATAGCAAAGGATATCATATTGAGAGGTAGAAGGGTTGGAGGCAAAGAAGCAGAATCTATTGGGCTTGTGAATTACTGCGTTGCTGCTGGTGAAGCTTATCCAAAAGCACTTGAGGTTGCTAGGGATATCAATGACAAGGGTCCAGTAGCTATAAGGGCTGGTAAAAGAGCAATAGAAGAGGGACTATTAGTGAATGACTCAACGGAAGCACAAGATTTGGAAGAAGACTGCTATGAGATGACATTGAATACCAATGATAGGTTAGAAGGCTTGGCTGCTTTTGTTGAGAAGCGAAAGCCAATCTACAAAGGTCAATGA 960 0.4417 MFAFRALSRSVGRECTDIPNRKLSCFTFVPTSQKTDANPWHPHYHSRRTLILEPLASEYVKLQKLHASDSGIIEVRLDRPENKNAIDTKLMRGLKHVLELIHEDSSANVAIFTSSVPGVYCAGADLKERKTFSVSEVREYSKVLRATFSYLEALPIPTIAAIEGAALGGGLELALACDFRICGEDALLGLPETGHAIIPGAGGTRRLPRLVNKAIAKDIILRGRRVGGKEAESIGLVNYCVAAGEAYPKALEVARDINDKGPVAIRAGKRAIEEGLLVNDSTEAQDLEEDCYEMTLNTNDRLEGLAAFVEKRKPIYKGQ 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3434 319 CDD crotonase-like 69 257 - -
Sto6g3434 319 SUPERFAMILY ClpP/crotonase 64 318 IPR029045 -
Sto6g3434 319 Gene3D - 55 259 - -
Sto6g3434 319 ProSitePatterns Enoyl-CoA hydratase/isomerase signature. 159 179 IPR018376 GO:0003824
Sto6g3434 319 Pfam Enoyl-CoA hydratase/isomerase 69 319 IPR001753 GO:0003824
Sto6g3434 319 PANTHER ENOYL-COA HYDRATASE-RELATED 47 316 - -
Sto6g3434 319 Gene3D - 260 319 IPR014748 -
Sto6g3434 319 PANTHER FI23914P1-RELATED 47 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3434 Sto-Chr6 40112772 40114951 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3434 39 316 Acyl Lipid Metabolism Gene Families AT1G60550 26.596 4.08e-23 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3434 K05607 - gmx:100306241 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3434 6 40112772 40114951 Sto6g3434 6 40112772 40114951 ECH