Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3433 ATGGCTACCATCGACGAAAGTGCTTCTGCTAAGAGGTGGCTTCCTCTTGAAGCTAACCCTGATGTGATGAACCAGTTTCTTTGGGGTCTAGGGCTTCCAGAGAATGAGGCGGAGTGCTATGATGTGTATGGTTTAGATGAAGAACTACTGGAAATGGTTCCAAAGCCTGTACTTGCAGTACTTTTTCTTTATCCCATAACCGCAAAGACTGAAGAAGAGAGGTTACAACAGGAAAATGATAAAAAGGAACATAGCAATAGAGTGTATTTTATGAAACAAACTGTGGGAAATGCTTGTGGCACAATAGGACTTCTTCATGCTCTTGGGAACATAACTTCTGAGGTCAATCTTATTGATGAATCATTCTTTGATAGGTTCTTTAAAACTACTGCAAGCATGGATCCATTACAGCGTGCATCATTTCTTGAGAATGACAGAGAAATGGAAGTTGCTCATTCAGTAGCCGCCACTGCTGGTGAAACAGAGGCATCGGATAATGTGGACACTCATTTCATCTGCTTTGTTTGTGTTGATGGTGAACTTTATGAGCTTGATGGAAGAAAATCAGGACCTATATCTCACGGTCAATCCTCATCAAATACTCTTCTGAGGGATGCAGCAAAAGTCATCCAGAGTATGATCCAGAAAAATCCAAACTCCCTCAACTTCAATGTCATTTCCATTTCAAAGAAATCTGGAGACGGAAATTAA 711 0.4079 MATIDESASAKRWLPLEANPDVMNQFLWGLGLPENEAECYDVYGLDEELLEMVPKPVLAVLFLYPITAKTEEERLQQENDKKEHSNRVYFMKQTVGNACGTIGLLHALGNITSEVNLIDESFFDRFFKTTASMDPLQRASFLENDREMEVAHSVAATAGETEASDNVDTHFICFVCVDGELYELDGRKSGPISHGQSSSNTLLRDAAKVIQSMIQKNPNSLNFNVISISKKSGDGN 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3433 236 SUPERFAMILY Cysteine proteinases 11 230 IPR038765 -
Sto6g3433 236 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 7 232 IPR001578 GO:0004843|GO:0006511
Sto6g3433 236 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 7 232 - -
Sto6g3433 236 CDD Peptidase_C12_UCH_L1_L3 13 228 - -
Sto6g3433 236 Pfam Ubiquitin carboxyl-terminal hydrolase, family 1 13 214 IPR001578 GO:0004843|GO:0006511
Sto6g3433 236 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 15 32 IPR001578 GO:0004843|GO:0006511
Sto6g3433 236 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 53 65 IPR001578 GO:0004843|GO:0006511
Sto6g3433 236 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 93 110 IPR001578 GO:0004843|GO:0006511
Sto6g3433 236 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 165 176 IPR001578 GO:0004843|GO:0006511
Sto6g3433 236 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 181 191 IPR001578 GO:0004843|GO:0006511
Sto6g3433 236 Gene3D - 7 231 IPR036959 GO:0004843|GO:0006511
Sto6g3433 236 Coils Coil 67 88 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3433 K05609 - gmx:100527718 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3433 6 40108832 40111906 Sto6g3433 6 40108832 40111906 ECH