Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3380 ATGAGGCCGAAAGATAAGGATATAGTGATTGCAAGAGGTGCTGGGGAAGACGAGTTATCTTCTGGTATGCACAAACCTAGGTTTGGCAAAGTAAGTGGGAGTGGGACTAAATCTCTTCATCCACCGATTGAAGCGACTTGGGAACTACCTCCTTTGAAAGAGAAGAAGGCTTCTTCGTCATCCATCAAGTCCCTGTTGGCTCACCCTTTAAAGCTTCGGGAGTCACTCAAGAAACTTGGGAAGAGTAAAAGCATGCAAATGATTTTAGAAGGTCCTCGTGATTTGAAAGATGAGCAACTTGTTGACTCTTTCCGGGAAATGCTGTTCGTGGAGGGTCTCTTGCCTCCCAAGCACAACGATTATCATACGCTTCTACGGTTTCTGCGCATGAGGGACTTCGACATGTTAAAAGCCAAAGAAATGTTTCTGAATTTTCTGAAATGGCGGGAGGAATATCGAGTAGATATGATTCCTAAGGAATTCAAATTCACGGAGTACACAGAAGTAAAGAAATGCTATCCTCACGGTTACCATGGAGTTGACAGACATGGAAGACCGCTGTATATAGAGAGAATGGGTATGGTAGACCTGAACAAACTACTGCAAGTAACCACAATTGACAGGTTTATTAAGTATCACGTGTCAGAGCAAGAGAAAACACTAAACATAAGATACCCTGCATGTTCACTAGCAGCTAAAAGGCATATAGCTTCCACCACTACTATTTTAGATGTAAACGGTGTGGGAATGTCTAATTTCTCCAAGCCTGCGAGATACCTCTTCACCGAAATTCAGAAGATTGATAGCAATTACTATCCTGAGACACTAAATCGGCTGTTTATTATCAATGCTGGATCTGGGTTTAGGATGTTGTGGAAGGCGGTGAGGGCCTTTCTGGATGTATTGGGTGCTAATTATCTTCGTGTTCTACTTGAGGCTATTGATCCAAGTGATTTGCCAAGTTTTCTGGGTGGTGAGTGCTTATGTAACGAGTCTGGAGGTTGCATGATGAGTGATAAAGGGCCCTGGACCGATACAGAAGTACTAGAAATGATTCAGACAATTTCCTTGAGGAGAGAGATGACTTCAGAAGATTCGTGGGTTGACAATGGCATCCAAAATGAAGGTGGAGTTGGTGGAACGAATGCAGGACCAGACTTTCCTTATAAGCTGGCACTAAGTAAAATTAATGGGCTAGAAGCTGCTCTTGGAGACATGAAGCATAAAATGAGGACACTGGAAGCTGCAATTGACGACACCAAGATGACGACCAAGAAGATATTGTGTTATGCAGATCTGGGAAGTGCTCACTCTATCTTGACCTGGAAAACGTCCTGTCGTTCTTCCTCCTTGACCTTGGGAATCATAATCTTCAAAACCCCATTCTTCATTTCAGCTTTGATAGAGTCAAGCTTGTACAATTTGGGAGGAATATCAAGTCTGCTAGAGAACCTCCTAGCTCCATCCTCCTCCTCATTCTCTGATTCCTTCCCTCCCTCTCCTTTCACTATCAGAGTGTTCTGCTCCACCGCCACTTTGACGTCTTCCTTACCAAGCCCAGGCATATCCATTCGCAGAAACAGAGCATTCTCATCTTCCCTCACATCCCATCCTCTCCTCGACCCTGCTCCAACTCCACGCGACGCAGCTAGAAATGGATTATCCATGAATTGA 1674 0.4415 MRPKDKDIVIARGAGEDELSSGMHKPRFGKVSGSGTKSLHPPIEATWELPPLKEKKASSSSIKSLLAHPLKLRESLKKLGKSKSMQMILEGPRDLKDEQLVDSFREMLFVEGLLPPKHNDYHTLLRFLRMRDFDMLKAKEMFLNFLKWREEYRVDMIPKEFKFTEYTEVKKCYPHGYHGVDRHGRPLYIERMGMVDLNKLLQVTTIDRFIKYHVSEQEKTLNIRYPACSLAAKRHIASTTTILDVNGVGMSNFSKPARYLFTEIQKIDSNYYPETLNRLFIINAGSGFRMLWKAVRAFLDVLGANYLRVLLEAIDPSDLPSFLGGECLCNESGGCMMSDKGPWTDTEVLEMIQTISLRREMTSEDSWVDNGIQNEGGVGGTNAGPDFPYKLALSKINGLEAALGDMKHKMRTLEAAIDDTKMTTKKILCYADLGSAHSILTWKTSCRSSSLTLGIIIFKTPFFISALIESSLYNLGGISSLLENLLAPSSSSFSDSFPPSPFTIRVFCSTATLTSSLPSPGISIRRNRAFSSSLTSHPLLDPAPTPRDAARNGLSMN 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3380 557 CDD SEC14 166 326 IPR001251 -
Sto6g3380 557 MobiDBLite consensus disorder prediction 1 42 - -
Sto6g3380 557 SUPERFAMILY CRAL/TRIO N-terminal domain 95 160 IPR036273 -
Sto6g3380 557 MobiDBLite consensus disorder prediction 535 557 - -
Sto6g3380 557 SMART CRAL_TRIO_N_2 120 145 IPR011074 -
Sto6g3380 557 SUPERFAMILY CRAL/TRIO domain 165 353 IPR036865 -
Sto6g3380 557 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 165 340 IPR001251 -
Sto6g3380 557 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 33 427 - -
Sto6g3380 557 Pfam CRAL/TRIO domain 173 325 IPR001251 -
Sto6g3380 557 MobiDBLite consensus disorder prediction 1 24 - -
Sto6g3380 557 Gene3D - 74 152 - -
Sto6g3380 557 Gene3D - 153 356 IPR036865 -
Sto6g3380 557 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH11 33 427 - -
Sto6g3380 557 SMART sec14_4 165 328 IPR001251 -
Sto6g3380 557 Coils Coil 396 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3380 Sto-Chr6 39800620 39804452 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3380 98 322 Acyl Lipid Metabolism Gene Families AT5G47730 26.829 6.96e-18 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3380 - - gmx:100807344 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3380 6 39800620 39804452 Sto6g3380 6 39800620 39804452 ECH