Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3379 ATGAGCACTGGGGAGCTCCTTAGCATCGAACCTCTCGAACTCAAGTTCCCCTTTGAGTTGAAGAAGCAGATCTCATGCTCCATTCAATTGTCAAATAAGACCGACAGCCATGTAGCTTTCAAGGTCAAAACAACCAACCCGAAGAAGTATTGTGTTCGTCCAAACACTGGAGTTGTTTTGCCGCGATCTACATGTGATGTTATAGTCACCATGCAAGCACAAAAAGAAGCTCCACCTGATATGCAATGCAAGGATAAGTTTCTTCTTCAAAGTGTAAAGAAAGATGAAACTATTACCCCAAAGGATATCACTGCAGAAATGTTCAATAAGGAGTCAGGGAATGTGGTCGAGGAGTGCAAATTGAGAGTGCTGTATGTTTCTCCGCCTCAACCACCATCTCCAGTTCCAGAAGGTTCAGAGGAAGGATCATCACCCAGAGCCTCTGTTTCAGAAAATGGAAATGTCAATAATGCTGAGTTCGCAACAtatattttggcacTGCAGGTAACAAAGGCGTTTGCTGAACGACCTGAGACTCAAGACAAATCTACAGAGGCAAAAGCTTTAATTTCAAGGCTGACCGAGGAGAAGAATAATGCAGTTCAACTAAATAATAAGCTACGCCAGGAATTGGAGCTGCTGAAGCGTCAAGGCAACAAAAATCGTGGCGGAGTCTCGATTGTGTTTGTCATCTTAATGGGCTTGCTGGGCATAATTATGGGGTATCTCATGAAGAAGACCTAA 744 0.4288 MSTGELLSIEPLELKFPFELKKQISCSIQLSNKTDSHVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQAQKEAPPDMQCKDKFLLQSVKKDETITPKDITAEMFNKESGNVVEECKLRVLYVSPPQPPSPVPEGSEEGSSPRASVSENGNVNNAEFATYILALQVTKAFAERPETQDKSTEAKALISRLTEEKNNAVQLNNKLRQELELLKRQGNKNRGGVSIVFVILMGLLGIIMGYLMKKT 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3379 247 MobiDBLite consensus disorder prediction 127 152 - -
Sto6g3379 247 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Sto6g3379 247 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 245 IPR016763 GO:0005789
Sto6g3379 247 SUPERFAMILY PapD-like 2 141 IPR008962 -
Sto6g3379 247 Coils Coil 186 217 - -
Sto6g3379 247 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 245 - -
Sto6g3379 247 Gene3D Immunoglobulins 2 130 IPR013783 -
Sto6g3379 247 PIRSF VAMP_assoc_prot 1 246 IPR016763 GO:0005789
Sto6g3379 247 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3379 Sto-Chr6 39794924 39798703 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3379 - - gmx:100527687 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3379 6 39794924 39798703 Sto6g3379 6 39794924 39798703 ECH