Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3358 ATGGTTAACGACAAATGGTATGACACAAGGGGCGTGTGGACCGGGTCCGCCACCATCTTACCCGATGGCCAGGTCGTCATGCTCTACACCGGTTCCACCAACGAGTCGGTCCAAGTTCAAAACCTTGCTTATCCCGCGGACCCAACCGACCCGCTCCTCATCGACTGGGTCAAATACTCAGGGAACCCGGTTTTGGTGCCACCACCGGGCATTGGTGTGAAAGACTTCCGTGACCCAACCACCGCTTGGCTGACCTCGGAAGGCAAATGGCGCATCACCATCGGGTCCAAGGTCAACAAGACGGGCATCACCTTGGTTTATGAGACCAAGGATTTCAAGACGTTCGAGCGGATAGAGGGTGTGATGAATGCTGTGGCAGGCACTGGCATGTGGGAGTGTGTGGACTTCTACCCTCTGAACAAGACATCCGATGTTGGTGCTGATACATCCGTGAATGGGGCAGATGTGAAGCACGTGATTAAGGTCAGTCTGGATGATGACAGACATGATTATTACGCTCTTGGGACTTATGATGAGAAGATGGTTAAGTTTGTAGCAGATGATGCCAAGAATGATGTTGGTATTGGACTTAGGTATGACTATGGTATCTTCTATGCATCCAAGACCTTTTATGATCAGAGTACCAAGAGGAGAGTGTTGTGGGGTTGGATTGGTGAGTCCGACAGTGAAATTGCTGATGTTGCCAAAGGATGGGCTTCTGTTCAGAGTGTCCCAAGAACAGTGGTGCTTGATAGGAAGACTGGAACCAACTTACTTCAATGGCCTGTTGAGGAGGTGGAGAAATTGAGATTGAGAAGCGATGAATTTAAAAATGTGAATGCCAAGCCAGGCTCTGTTATGCCCTTAAACATTGGAACAGCCACCCAGTTGGATATTGTTGCGGAGTTTGAGATAGACAAGGAAGCCCTTGAGAAGACAACCCCCTCCAATTCGGAGTATGTTTGTGGGACCAGCGGTGGAGCTGCACAACGTGGTGCCTTGGGACCTTTTGGTCTTTTGGTTCTAGCAGATGACGGCCTCTCCGAATACACTCCAGTTTACTTCTATGTCACCAAAGGAATCGATGGAAATCTCAAGACTTCCTTCTGCTCCGATCAATCAAGGTAA 1128 0.4938 MVNDKWYDTRGVWTGSATILPDGQVVMLYTGSTNESVQVQNLAYPADPTDPLLIDWVKYSGNPVLVPPPGIGVKDFRDPTTAWLTSEGKWRITIGSKVNKTGITLVYETKDFKTFERIEGVMNAVAGTGMWECVDFYPLNKTSDVGADTSVNGADVKHVIKVSLDDDRHDYYALGTYDEKMVKFVADDAKNDVGIGLRYDYGIFYASKTFYDQSTKRRVLWGWIGESDSEIADVAKGWASVQSVPRTVVLDRKTGTNLLQWPVEEVEKLRLRSDEFKNVNAKPGSVMPLNIGTATQLDIVAEFEIDKEALEKTTPSNSEYVCGTSGGAAQRGALGPFGLLVLADDGLSEYTPVYFYVTKGIDGNLKTSFCSDQSR 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3358 375 SUPERFAMILY Concanavalin A-like lectins/glucanases 262 374 IPR013320 -
Sto6g3358 375 Gene3D - 274 375 - -
Sto6g3358 375 Gene3D Glycosyl hydrolase domain; family 43 1 273 IPR023296 -
Sto6g3358 375 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 1 375 - -
Sto6g3358 375 SMART glyco_32 2 375 IPR001362 GO:0004553|GO:0005975
Sto6g3358 375 Pfam Glycosyl hydrolases family 32 C terminal 265 359 IPR013189 -
Sto6g3358 375 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 1 375 - -
Sto6g3358 375 Pfam Glycosyl hydrolases family 32 N-terminal domain 1 262 IPR013148 -
Sto6g3358 375 SUPERFAMILY Arabinanase/levansucrase/invertase 3 263 IPR023296 -
Sto6g3358 375 CDD GH32_Fruct1-like 1 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3358 Sto-Chr6 39644575 39645896 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3358 1 375 Glycoside Hydrolase AT1G62660 65.183 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3358 K01193 - gmx:100799487 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3358 6 39644575 39645896 Sto6g3358 6 39644575 39645896 ECH