Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3330 ATGTTGAAGAGCACCACAGATATGGATTGGTCTGCCTGTACGGACGAATACGAAAAGCTCGTTATACGGATGAGCACCCCCAGgGTTGTAATAGACAATGCCGTATGCTCCACAGCAACAATAGTCAAGGTTGATAGCGCTAGAAGTCATGGCATTCTCTTGGATGCCGTACAAGTTTTAACTGATCTCAACCTTTCAATTCAGAAGGCTTACATTTCCTCTGATGGCAAGTGGTTCATGGATGTTTTTCATGTAACCGATCAAAACGGAAGCAAGTTAACAGATGAGAGCGTTTTAAGATATATTGAACAGTCTCTGGGAAGCATTCAAAATGGAAGAACCAACCGCACCAATGGTCTCACTGCACTGGAATTAACTGGAACAGATCGGCTTGGTCTTCTTTCGGAGGTGTTTGCTGTACTGGCTGATCTGCAATGTGATGTGGTCGAGGCTAAGGTTTGGACTCACAATGGCCGGATTGCATCGCTTATATATGTAAAGGACTGCAATTCTGGATCCACCATTGAGGACTCTCAGAGAATTAATAGAATTGAAGCGCGATTGAGAAATGTTTTAAAGGGAGACAATGACATCAGAAGTGCAAAAACTTCTGTCTCTATGGCTGTGATGCACACTGAACGAAGGCTGCATCAGATGATGTTTGCTGACCGAGACTATGAGAGGACTCCCATTTTCAAGTTCAGCTTTGACACCCCTGTAGTGACCGTCCAGAATTGGGCAGAAAGGGGTTATTCGGTTGTGAATGTTCAGTGCAAGGATCGTATTAAGCTCCTATTTGATGTTGTTTGCAATCTGACAGACATGGAATATGTTGTGTTTCATGCAACAATTAACACAACAAGAGACCAAGCTTATCTGGAATTTTATATTAGACATAGGGATGGAACCCCAATTAGTTCAGAAGCAGAGCGTCAACGTGTAATCCAATGCTTACAAGCTGCCGTGGAAAGGAGGGCATCTGAGGGTGTTACGCTAGAGTTATGCACGGAAGATAGGCAGGGTCTTCTGGCAGAGGTGATGAGAACATTCCGAGAGAATGGACTGAATGTGACGAGGGCTGAGATATCCACCTTGGAGGACAAAACTGCAAATGTATTCTACGTAACGGATGCAGTTGGGAACCGAGCTGATCCCAAAATCATTGAATCTGTGAGACAGAAAATTGGGTTGAGTAATTTAAAAGTGAAGGAATTGCCATTGATATGTCATGAGAAGGCAGATAGGGAAGATCAAGCAGTAGGAGTGGGTGGCACAGTGTTGTTATCTCTTGGGAGCCTCGTGAGAAGGAATCTGTACAATTTGGGTTTAATCAAATCTTGTTCTTAA 1347 0.4358 MLKSTTDMDWSACTDEYEKLVIRMSTPRVVIDNAVCSTATIVKVDSARSHGILLDAVQVLTDLNLSIQKAYISSDGKWFMDVFHVTDQNGSKLTDESVLRYIEQSLGSIQNGRTNRTNGLTALELTGTDRLGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSTIEDSQRINRIEARLRNVLKGDNDIRSAKTSVSMAVMHTERRLHQMMFADRDYERTPIFKFSFDTPVVTVQNWAERGYSVVNVQCKDRIKLLFDVVCNLTDMEYVVFHATINTTRDQAYLEFYIRHRDGTPISSEAERQRVIQCLQAAVERRASEGVTLELCTEDRQGLLAEVMRTFRENGLNVTRAEISTLEDKTANVFYVTDAVGNRADPKIIESVRQKIGLSNLKVKELPLICHEKADREDQAVGVGGTVLLSLGSLVRRNLYNLGLIKSCS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3330 448 Pfam ACT domain 331 393 IPR002912 -
Sto6g3330 448 SUPERFAMILY ACT-like 118 193 IPR045865 -
Sto6g3330 448 SUPERFAMILY ACT-like 327 398 IPR045865 -
Sto6g3330 448 ProSiteProfiles ACT domain profile. 331 410 IPR002912 -
Sto6g3330 448 CDD ACT_ACR_1 39 108 - -
Sto6g3330 448 Gene3D - 120 195 - -
Sto6g3330 448 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 8 446 - -
Sto6g3330 448 CDD ACT_ACR_2 121 194 - -
Sto6g3330 448 ProSiteProfiles ACT domain profile. 122 206 IPR002912 -
Sto6g3330 448 ProSiteProfiles ACT domain profile. 41 116 IPR002912 -
Sto6g3330 448 SUPERFAMILY ACT-like 36 104 IPR045865 -
Sto6g3330 448 CDD ACT_ACR_3 251 325 - -
Sto6g3330 448 Gene3D - 325 401 - -
Sto6g3330 448 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 8 446 IPR040217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3330 Sto-Chr6 39434070 39436555 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3330 - - gmx:100794729 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3330 6 39434070 39436555 Sto6g3330 6 39434070 39436555 ECH