Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3327 TTGGTGCTGTCAGAACTCAGAGTTCAACGAAGAATAGCCCTTCCATTGATGGCCATGAACTTGGCTTGGTTCGCCAAGACAGCCATCACCACAGCCTTTCTTGGCCGTCTGGGTCAGCTCAACTTGGCCGGCGGTGCCCTTGGTTTCACTTTCGCTAACGTCACCGGCTTCTCCGTCTTGAACGGTCTTTCCGGTGCCATGGAACCCATCTGTGGACAAGCTTATGGAGCCAAGAACTTCAGGCTCCTTCACAAGACCCTTCTCATGACAACCCTCTTATTGCTCTCCATAACACTTCCCATCTCTTTCTTGTGGCTCCACATCGACCAAATCTTAATCCATTTCGGCCAACAAAAAGATATCTCTGCTGTGGCTACAACTTACATTAAATATCTCATACCCGACTTGCTAGTCACCTCATTTCTCTGTCCCTTAAAGGCCTACTTGAGCTCTCAAAGCATAAATGTTCCCACCATGTTTAGTTCAGCCATAGCTCTGGCTTTTCACATACCCATAAACATAGTGCTTTCAAAGGCCATGGGCCTCAGAGGAGTTTCAATGGCGGTTTGGATCACTGACCTCATAGTTGTGGTTCTATTGGCCATCTATGTTTTGATTCTGGAAAACAGGAAGGAGAGTAGGTGGAGGGAAGGAGGAGGGTGGTGGGATCAGAGCATGAAGGATTGGGGTAGATTGGTCAAGCTTAGTGGCTCGTGTTGCCTCAATACGTGCCTCGAGTGGTGGTGCTATGAGATCCTAGTCCTGCTCACTGGTCACCTGGCAAACGCTAAGCAAGCAGTGGGAGTGTTAGCCATTGTGCTTAACTTCGACTATTTGCTATTCTCGGTGATGCTATCGCTTGCCACGTGTGTTTCCACACGTGTGTCCAATGAGCTTGGGGCGAACAGAGCCGCCCATGCTTACCGATCAGCCTGTGTGTCTCTGGCAGGAGGCATAATCTCAGGCTGTATAGGAAGCTTGGTGATGGTGGGTGTGAGGGGAATATGGGGTCCACTGTTCAGCAACGATAAGGGAATCATAAGGGGAGTGAAGAAGACGATGTTGCTGATGGCTTTAATGGAGGTTTTTAACTTTCCGTTGGTTGTTTGTGGAGGCATAGTTAGGGGAACGGCTAGACCCAGGCTGGGGATGTATGCCAATCTAAGTGGGTTTTATCTGCTGGCTCTGCCTTTGGGTGTGGTTTTTGCATTCAAGCTTCATCTTGGGCTTGATGGGCTCTTTGTAGGACTAGTCATTGGTGTTTTTACGTGCTTGATGCTATTATTGGTGTTTATTGCAAGGATAAATTGGGATGAAGAGGCTCGAAAGGCACTAATACTAGCCTCTAGTGTGCAGGAGCAGGAAGTGGTTAGATTTGACGCAAACCCACGAATTGAGGCCCTTGAAAATGTTAAAGTATAA 1422 0.4817 LVLSELRVQRRIALPLMAMNLAWFAKTAITTAFLGRLGQLNLAGGALGFTFANVTGFSVLNGLSGAMEPICGQAYGAKNFRLLHKTLLMTTLLLLSITLPISFLWLHIDQILIHFGQQKDISAVATTYIKYLIPDLLVTSFLCPLKAYLSSQSINVPTMFSSAIALAFHIPINIVLSKAMGLRGVSMAVWITDLIVVVLLAIYVLILENRKESRWREGGGWWDQSMKDWGRLVKLSGSCCLNTCLEWWCYEILVLLTGHLANAKQAVGVLAIVLNFDYLLFSVMLSLATCVSTRVSNELGANRAAHAYRSACVSLAGGIISGCIGSLVMVGVRGIWGPLFSNDKGIIRGVKKTMLLMALMEVFNFPLVVCGGIVRGTARPRLGMYANLSGFYLLALPLGVVFAFKLHLGLDGLFVGLVIGVFTCLMLLLVFIARINWDEEARKALILASSVQEQEVVRFDANPRIEALENVKV 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3327 473 PANTHER MULTIDRUG RESISTANCE PROTEIN 2 452 - -
Sto6g3327 473 TIGRFAM matE: MATE efflux family protein 15 413 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto6g3327 473 Pfam MatE 15 174 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto6g3327 473 Pfam MatE 239 400 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto6g3327 473 CDD MATE_eukaryotic 5 443 IPR045069 GO:0042910|GO:1990961
Sto6g3327 473 PANTHER PROTEIN DETOXIFICATION 56 2 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3327 Sto-Chr6 39416415 39417836 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3327 K03327 - gmx:100804083 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3327 6 39416415 39417836 Sto6g3327 6 39416415 39417836 ECH