Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3300 ATGGGCTTCCCAACTAACGGCGCCGCCGGCGAAAAGCCGCTTAAGTTCCTGATCTATGGCCGCACCGGCTGGATTGGCGGTATCCTCGGCAAACTCTGCGAAGCTCAGGGAATCGACTTTGCTTATGGCTCCGGCCGCCTCGAGAATCGATCCTCACTGGAAGCCGACATAGCGGAGGTGAAGCCGAGCCATGTTTTTAACGCGGCTGGAGTGACCGGACGGCCGAATGTGGACTGGTGCGAATCTCACAAGGTGGAGACCATCAGGACCAACGTGGTTGGCACTTTGACCTTGGCCGATGTGTGCAGGGAGAGAGGTCTCATCCTCATCAACTATGCCACCGGATGCATCTTTGAGTACGATTCCAATCATCAAATCGAATCCGGCGTCGGCTTTAAGGTAGTGAACATTCCAAATTCAATGACTATactggatgaactccttccaatttCCTTAGAAATGGCAAAGAGAAACCTCACTGGAATCTGGAATTTCACAAACCCTGGAGTGGTAAGCCACAATGAAATCTTAGAGATGTACAAGGAATATATTGACCCCAACTTTACTTATAAGAATTTCACTCTAGAGGAGCAAGCTAAGGTAATAGTTGCCCCTAGGAGCAACAATGAGCTTGACACCGCCAAGTTGAAGAAAGAATTCCCTGAACTCTTACCTATCAAGGAATCTCTCATTAAGTATGTTTTCAAGCCAAATGAAAAGGTTAAAGCTTGA 732 0.4686 MGFPTNGAAGEKPLKFLIYGRTGWIGGILGKLCEAQGIDFAYGSGRLENRSSLEADIAEVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRERGLILINYATGCIFEYDSNHQIESGVGFKVVNIPNSMTILDELLPISLEMAKRNLTGIWNFTNPGVVSHNEILEMYKEYIDPNFTYKNFTLEEQAKVIVAPRSNNELDTAKLKKEFPELLPIKESLIKYVFKPNEKVKA 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3300 243 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 8 133 - -
Sto6g3300 243 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 133 239 - -
Sto6g3300 243 Pfam RmlD substrate binding domain 15 123 IPR029903 -
Sto6g3300 243 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 232 IPR036291 -
Sto6g3300 243 Gene3D - 6 130 - -
Sto6g3300 243 Gene3D - 131 243 - -
Sto6g3300 243 PANTHER BNAC05G13120D PROTEIN 8 133 - -
Sto6g3300 243 PANTHER BNAC05G13120D PROTEIN 133 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3300 Sto-Chr6 39225920 39227750 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3300 K12451 - gmx:100801553 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3300 6 39225920 39227750 Sto6g3300 6 39225920 39227750 ECH