Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3296 ATGCAAAGTGCAACGACAGCTCCGTACATCTCCTACTACGACTACATCATAATAGGAGGGGGTACCTCTGGCTGCCCTTTAGCAGCGACACTGTCCCAAAGATATAGGGTCCTATTGCTTGAACGAGGTGGGTCCCCTTACGGCAACCCTAACATCACCAACTTGGCCTCCTTCGGCGTCCCTCTCTCCGACACCTCCCCTTCCTCTCCCGCCCAGCGCTTCATCTCCCAAGACGGCGTCATCAATTCTCGCGCCCGCGTCCTCGGCGGCGGCTCCGCCTTGAACGCCGGCTTCTACACTCGCGCCGGTCATCTCTACGTGAGGCGCGCCGGCTGGGACGCGGCCGCCGTGAACCGGTCCTACGAATGGGTTGAGCGCGTGGTGGCCTTCGAACCCCCGATGCGGCAGTGGCAGTCGGCCGTGCGCGATGCGCTGCTGGAAATTGGAGTTTCGCCATTCAATGGGTTCACCTATGAACATATTGTGGGAACCAAGGTTGGTGGCTCCATCTTTGACCGCAATGGCCACCGCCATACAGCTGCTGATCTTCTTCAATACGCTAATCCCTCCACAATCACCCTGCTCTTGCACGCCACCGTACATAGGATTCTCTTTACAATTCAAGGAACAAGACGAGTGGCCCGTGGAGTAATATTCATGGACGAATCGGGTGCTACACACCGGGCCTATTTGAGGCAGGGGTCCATGAACGAGATCATTGTATCAGCTGGTGCACTTGGAAGCCCACAGCTTCTAATGTTGAGTGGAATAGGCCCAGCAGCCCACCTCAGGGCCCATAACATCGATGTAGTATTAGACCAACCCCTGGTAGGACAAGGAATGTCCGATAACCCTATGAATGCTGTATTTGTACCGTCGCCTATTCCCGTGGAGGTCTCCCTCATACAGGTTGTCGGCATCACCAACTTCGGTAGCTACATCGAAGCCGCTAGCGGCGAAAGTTTCGGTCACGGCAACCCAAGGAACTACTACGGCATGTTCTCCCCCAAGATTGGTCAATTCTCGAAAGTACCACCGAAGGAAAGGACCCCAGAGGCCCTAGCAAAGGCAATAGAAGAGATGGAGAGCGTGGAGGTGGAGGAAGCAGCATTGAGAGGCGGATTCATACTGGAAAAGATAATGGGCCCAATTTCAACGGGCCATTTGGAGCTCCGAAGCCGTGATCCAAACGAGAACCCGGTAGTGACGTTCAACTACTTCAAGGACCCGCGAGACTTGGCGAGATGTGTGGAAGGGATGAGAAGCATCGAGAGAATCATAGAATCAAAGGCATTCTCTCCATTCAGATACAAGAATAATGTAGGAATGGAGATGATGAGTTCGAGATTGCCTGTGAATTTATTTCCCAAACAAGTGAATAATGCGTCAAGGAGTTTGGAGGAGTTTTGTAGGGACACAGTGATGACGATATGGCATTACCATGGAGGGTGCCAAGTAGGGAGAGTGGTAGATAGAGATTATAAGGTTCTTGGCATTCACTCATTGCGTGTTATTGATGGTTCTACTTTTAATTATTCTCCGGGGACTAATCCTCAAGCCACCGTCATGATGCTTGgaagGTATATGGGAGTCAAAATACTAACTCACAGACTTGCTGCCAGTAATTAG 1629 0.52 MQSATTAPYISYYDYIIIGGGTSGCPLAATLSQRYRVLLLERGGSPYGNPNITNLASFGVPLSDTSPSSPAQRFISQDGVINSRARVLGGGSALNAGFYTRAGHLYVRRAGWDAAAVNRSYEWVERVVAFEPPMRQWQSAVRDALLEIGVSPFNGFTYEHIVGTKVGGSIFDRNGHRHTAADLLQYANPSTITLLLHATVHRILFTIQGTRRVARGVIFMDESGATHRAYLRQGSMNEIIVSAGALGSPQLLMLSGIGPAAHLRAHNIDVVLDQPLVGQGMSDNPMNAVFVPSPIPVEVSLIQVVGITNFGSYIEAASGESFGHGNPRNYYGMFSPKIGQFSKVPPKERTPEALAKAIEEMESVEVEEAALRGGFILEKIMGPISTGHLELRSRDPNENPVVTFNYFKDPRDLARCVEGMRSIERIIESKAFSPFRYKNNVGMEMMSSRLPVNLFPKQVNNASRSLEEFCRDTVMTIWHYHGGCQVGRVVDRDYKVLGIHSLRVIDGSTFNYSPGTNPQATVMMLGRYMGVKILTHRLAASN 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3296 542 ProSitePatterns GMC oxidoreductases signature 2. 244 258 IPR000172 GO:0016614|GO:0050660
Sto6g3296 542 SUPERFAMILY FAD-linked reductases, C-terminal domain 281 483 - -
Sto6g3296 542 PIRSF Alcohol_oxidase 1 542 IPR012132 GO:0050660
Sto6g3296 542 PANTHER OSJNBA0019K04.7 PROTEIN 1 538 - -
Sto6g3296 542 Gene3D - 13 526 IPR036188 -
Sto6g3296 542 SUPERFAMILY FAD/NAD(P)-binding domain 12 535 IPR036188 -
Sto6g3296 542 Pfam GMC oxidoreductase 13 285 IPR000172 GO:0016614|GO:0050660
Sto6g3296 542 Gene3D - 130 476 - -
Sto6g3296 542 Pfam GMC oxidoreductase 383 527 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3296 Sto-Chr6 39199997 39201907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3296 1 537 Miscellaneous Gene Families AT5G51950 59.225 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3296 - - ahf:112722126 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3296 6 39199997 39201907 Sto6g3296 6 39199997 39201907 ECH