Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3289 ATGTGCCACTCATCGTCTTCCTCTTGTCTCTGTGAACACAATAAGCAGCACCAAATTAATATACCCACATCCAAAGTACATGATCTCGACAAGTCCACGCCTTTGATACCCAAATCCCCAACATTCGAAGAAAAAGGCCAAATCCCCCATGACACTAACAATACCCTTTTGTCTCTCATCTTCATGGAAGCAAAGTGCATCGCCAACATAGCCTTCCCCATGGTCCTAACCGGTCTTCTTCTTTACTCTCGCTCCATGATCTCCATGCTCTTCCTTGGTCGCCTCGGCGAGCTCGCCTTAGCCGGCGGCTCTCTCGCCATTGGATTCGCCAACATCACAGGTTACTCTGTTCTCTCCGGTCTCGCCATGGGAATGGAACCCATTTGCGGCCAAGCTTTTGGGGCCAAAAGATTCAAACTTCTCGGCCTCGCCATGCAAAGGACCGTGATTCTCCTCCTCTTCACCTCCATTTTCATAGCATTCCTCTGGTTCAACATGAACAAGGTATTAATCCTCTGCGGTCAAGAACAGGACATAGCTCACGAAGCTCAATCTTACATACTCTATTCCCTCCCCGATCTCGTCGCGCAGTCTCTCCTTCACCCTCTGCGAATCTACCTCCGAACACAATCCGTCACGCTCCCTCTCACATTCTGTGCTGCTCTGTCTATCCTCCTCCACATCCCCATCAATTACCTCCTCGTCTCTGTTCTTCAAATGGGGATTAAAGGCATCGCCTTGGGCTCTGTTCTCACCAATTTCAACCTCGTGGGGTCGTTAATTGTATACATAATGGTCTCGGGCATTTATAAGAAAACCTGGCCCGGCCTTTCCTCCTCGTGCTTCAAAGGGTGGAAGTCGCTATTAAACCTGGCGATTCCTAGCTGCGTCTCGGTTTGCTTGGAATGGTGGTGGTACGAAATCATGATCTTACTCTGCGGGTTGTTGATAAACCCACAAGCCACCGTTGCTTCCATGGGGGTTCTGATCCAAACGACGGCGTTAATATACATATTCCCGTCGTCTCTGAGCTTCGGCGTGTCCACCAGAGTGGGGAACGAATTGGGAGCGAATAATCCCCAAAGGGCGAAAATCGCGGCCACGGTGGGGTTGTGTTGGAGTTTCGTTCTGGGGTTTTCGGCATTGTTGTTTGCGATCTCGGTGAGGAAAGTGTGGGCCACGATGTTTACGGAGGATGGGGAGATCATTAAATTGACGGCGATGGTGCTGCCCATAATTGGGTTGTGCGAGCTGGGAAACTGCCCGCAGACCACCGTGTGCGGCGTTTTGAGGGGGACGGCGAGGCCGAAGTTGGGGGCGAACATTAATTTGGGATGCTTTTATCTTGTGGGAATGCCGGTGGCTGTGTGGCTAGGGTTCTTCGCGGGGTTTGACTTCAAAGGGTTGTGGATTGGTCTTATGGCTGCTCAGGCTTCGTGTATGGTGTGCATGTTGTTCGTGCTGGCTCGGACCAATTGGGAAGGTCAAGCCCAGAGGGCCAAGGAGCTTACGTCATCAGATTCCAGTGATGACGATGATGGGGAGGAGGAGGAATTGAAGGATGAAACAGAGAGGAAGGGTATATGTCGGTTGGTTGGCGACGAAAATAGACGAATGGGAGATGAAAATGTGGAGTGGTGGCTCTTGATCAGCCTCAGGTGA 1662 0.5114 MCHSSSSSCLCEHNKQHQINIPTSKVHDLDKSTPLIPKSPTFEEKGQIPHDTNNTLLSLIFMEAKCIANIAFPMVLTGLLLYSRSMISMLFLGRLGELALAGGSLAIGFANITGYSVLSGLAMGMEPICGQAFGAKRFKLLGLAMQRTVILLLFTSIFIAFLWFNMNKVLILCGQEQDIAHEAQSYILYSLPDLVAQSLLHPLRIYLRTQSVTLPLTFCAALSILLHIPINYLLVSVLQMGIKGIALGSVLTNFNLVGSLIVYIMVSGIYKKTWPGLSSSCFKGWKSLLNLAIPSCVSVCLEWWWYEIMILLCGLLINPQATVASMGVLIQTTALIYIFPSSLSFGVSTRVGNELGANNPQRAKIAATVGLCWSFVLGFSALLFAISVRKVWATMFTEDGEIIKLTAMVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYLVGMPVAVWLGFFAGFDFKGLWIGLMAAQASCMVCMLFVLARTNWEGQAQRAKELTSSDSSDDDDGEEEELKDETERKGICRLVGDENRRMGDENVEWWLLISLR 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3289 553 TIGRFAM matE: MATE efflux family protein 73 470 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto6g3289 553 Pfam MatE 73 233 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto6g3289 553 Pfam MatE 294 457 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto6g3289 553 PANTHER PROTEIN DETOXIFICATION 49 514 - -
Sto6g3289 553 CDD MATE_eukaryotic 63 499 IPR045069 GO:0042910|GO:1990961
Sto6g3289 553 PANTHER MULTIDRUG RESISTANCE PROTEIN 49 514 - -
Sto6g3289 553 MobiDBLite consensus disorder prediction 499 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3289 Sto-Chr6 39122055 39124203 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3289 K03327 - gmx:100811560 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3289 6 39122055 39124203 Sto6g3289 6 39122055 39124203 ECH