Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3273 ATGGCACTCCTCAAACTCAAATCGCTTCCTATATTGTCTCTCCTTCTACTCACTCTCAGCTTCACCTCCACCCAGGCCGCCCGATTCGACGTCACAAACAAATGCAGCTACACCGTGTGGGCCGCAGCCGTGCCCCGCGTTGGCGGCAAGCAGCTCAACTCCGGCGAGACCTGGAGCTTCGACATTGCCGCCGGCACCACACAGATCCGCATATGGGCCCGGACCAAGTGCAGCTTCGACGGGTCGGGTCGTGGGAAGTGCGAGACGGGTGGGTGTGGGGATGTGCTCCAATGCCAAGCCTTTGGGTCACCCCCAAACACCCTTGCCGAAATTGCCCTTAACCAATTCAACAACTTGGACTTCTACGACATCTCATTGGTGGACGGGTTCAATGTTCCCATGGAGTTCAGCCCCACCTGTTCGGCCACTGAATATTCTAAGTACTTCAAGAATAAGTGTCCTGATGCTTACAGTTATCCCAAGGACGATGCCACCAGCACATTCACCTGCCCTGGAGGAGCCAATTATAGGGTAGTCTTTTGCCCTTAA 549 0.5501 MALLKLKSLPILSLLLLTLSFTSTQAARFDVTNKCSYTVWAAAVPRVGGKQLNSGETWSFDIAAGTTQIRIWARTKCSFDGSGRGKCETGGCGDVLQCQAFGSPPNTLAEIALNQFNNLDFYDISLVDGFNVPMEFSPTCSATEYSKYFKNKCPDAYSYPKDDATSTFTCPGGANYRVVFCP 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3273 182 Pfam Thaumatin family 33 138 IPR001938 -
Sto6g3273 182 Gene3D Thaumatin 140 182 IPR037176 -
Sto6g3273 182 PANTHER OS03G0233200 PROTEIN 6 139 IPR001938 -
Sto6g3273 182 PANTHER OS03G0233200 PROTEIN 139 182 IPR001938 -
Sto6g3273 182 PIRSF PR5 137 182 IPR001938 -
Sto6g3273 182 PIRSF PR5 2 139 IPR001938 -
Sto6g3273 182 ProSiteProfiles Thaumatin family profile. 26 182 IPR001938 -
Sto6g3273 182 SUPERFAMILY Osmotin, thaumatin-like protein 27 182 IPR037176 -
Sto6g3273 182 SMART tha2 29 182 IPR001938 -
Sto6g3273 182 CDD TLP-P 29 182 - -
Sto6g3273 182 Gene3D Thaumatin 26 139 IPR037176 -
Sto6g3273 182 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Sto6g3273 182 PRINTS Pathogenesis-related protein signature 48 57 IPR001938 -
Sto6g3273 182 PRINTS Pathogenesis-related protein signature 70 81 IPR001938 -
Sto6g3273 182 PRINTS Pathogenesis-related protein signature 83 112 IPR001938 -
Sto6g3273 182 PRINTS Pathogenesis-related protein signature 120 136 IPR001938 -
Sto6g3273 182 PRINTS Pathogenesis-related protein signature 172 181 IPR001938 -
Sto6g3273 182 PANTHER THAUMATIN-RELATED 139 182 - -
Sto6g3273 182 PANTHER THAUMATIN-RELATED 6 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3273 Sto-Chr6 39033545 39034234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3273 140 182 Receptor kinase-like Gene Family AT5G38280 51.163 2.84e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3273 - - zju:107435670 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3273 6 39033545 39034234 Sto6g3273 6 39033545 39034234 ECH