Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3252 ATGAGGTTCGTGAAGCCGCTCCAGTTGGCTCTTAATTTGGCGAAAACACCTAAGAAGAAACGAGGACGGTTACTTGGTTTAGATGTTGGCGATAGATATGTCGGGGTAGCTTTTTCAGACCCGAAGAACAAAATTGCTTCTCCTTTCTGTGTTCTGGTCAGGAAGAAGACAAATATTGATAACCTGGCCAATGATTTTAGTACATTGATCTCTGAATTTTCTTCGAATACCTTTGTTGTTGGTATGCCTTTTGATAAACCACGATCTTCTTCTGAGGCCTATCAAGTGAAAGCTTTCATGGATGAACTAGGTAAAACAGGAAAGTTTGAAGGCCTACAATATACATATTGGAATGAGTGCTTCACGTCTAAGAATGTAGAATTGCTTCTAAAACCTTTGAACCTAAATCCAGTTCAAGAAAAGACTATACTTGACAAGTTTGCTGCTGTTGGAATACTTCAGGGGTATTTGGATTATGCTAACAGAAAAAAGGAGGAAGCCACAGAAGAACACTCCAAATAG 522 0.3927 MRFVKPLQLALNLAKTPKKKRGRLLGLDVGDRYVGVAFSDPKNKIASPFCVLVRKKTNIDNLANDFSTLISEFSSNTFVVGMPFDKPRSSSEAYQVKAFMDELGKTGKFEGLQYTYWNECFTSKNVELLLKPLNLNPVQEKTILDKFAAVGILQGYLDYANRKKEEATEEHSK 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3252 173 Hamap Putative pre-16S rRNA nuclease [yqgF]. 22 161 IPR005227 GO:0006364
Sto6g3252 173 Gene3D - 21 171 IPR037027 GO:0006139
Sto6g3252 173 SUPERFAMILY Ribonuclease H-like 22 160 IPR012337 -
Sto6g3252 173 TIGRFAM RNAse_H_YqgF: putative transcription antitermination factor YqgF 25 158 IPR005227 GO:0006364
Sto6g3252 173 Pfam Holliday junction resolvase 23 158 IPR005227 GO:0006364
Sto6g3252 173 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 1 167 IPR005227 GO:0006364
Sto6g3252 173 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 1 167 - -
Sto6g3252 173 CDD YqgF 24 158 IPR005227 GO:0006364
Sto6g3252 173 SMART rnase_8s 22 126 IPR006641 GO:0006139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3252 - - lja:Lj0g3v0306549.1 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3252 6 38913248 38915135 Sto6g3252 6 38913248 38915135 ECH