Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3243 ATGGGGAATCGACGGTTCACTCAGGTCGATACCAGCGACGATGAGGATGAAGCGCCACTTCGTTCGCAACACCAGCGGCAGCAACAGCAACAATCCTCCGCTTCCGAGGAGAACCGGTCGAAGCTGcgtaagaggaagaagatgaagcttccggaggaagaagatgatgagagGGACGacgaggaaaagaaaaagaagaggaaggagaaacaaaaggaagaagaaggctCGCAGAGTGTTGACGAAGATGAGGAACAGCCACAAGAAGACGCCAAACCAATTGGCGATCCCATTAGGGTTTCAGGGAAAGGAAGAGGGAGGAGAAAGCATTACGAGTCCTTCGAGTTCGATGGGAACCAATATACACTTGAGGATCCTGTACTTCTGGTGCCTGAGGATAAAGAACAAAAGCCATATGTGGCTATTATCAAGGAGATCACACAGTCCCAAAATGGCAGTATGATGGTGACGGGGCAGTGGTTTTATCGTCCTGAAGAAGCTGAAAGAAAAGGTGGTGGAAGCTGGCAATCACGCGATACGAGGGAGCTGTTTTATAGTTTCCACCGTGATGAGGTTCCAGCAGAATCTGTTATGCACAAGTGTGTTGTTCACTTTGTTCCCATAAACAAACAGCTTCCAAATCGTAAACAGCATCCTGGGTTTATTGTGCAAAAGGTGTATGACACTGTAGAAAGAAAACTTTGGAAGCTAACTGATAAGGACTATGAGGATAATAAACAGCAGGAGATTGATGATCTTGTTCATAAAACTCTAAAACGTATTGTTGATCTACCTGACATTGAAACTGAAGAAGCCCCTGCCGATCAGGAAGATCAGATGAAGAATAAAAGAAGCTTCAGGAAAAGGAACATTTCACCTCTTGATGTTTCAAGGGAGGATGAGGCAACTCCCAGGAATGAACAACAATTAAAACCAGAAACACCAGGAAGTTGTGTAAATAATGCCTCAGAGCATTATCAAATATTAGCCAATCTTAAGGTACTGACTGGAGATGCCCATCGTGACAAATGGCTGGAGAGGTTGCTTCAAAGCATTCAGTATATGTGTAACTCAGGTGACAGTTTACAGAAGGATGACAAAGCAAAGGACAATTCTGATGCAATAAATCATGGAAGCAATAATGGTATTTCAGTAACAGCAAATGACTGTCAAGACAAAGATCAAAAGAGTTCCAAGTCTTTTATTTGGCCAGATGATGTTGTTCCAGCCATAGTTGCCCTGGAAAAAGCTTCCCATGATACCCTTTCCTCAGATTTTCAGAAGTATAACCAAAAATTGCGGCAATTAGTATTTAATCTCAAGAACAAAACAAATCTAGCTCGCCGTCTTTTAAATGGAGAGCTGGAACCTTCAAAAATACTGAATATGTCACCCAATGAATTGAAGGAGGGTTTGACAGCTGAGGAAATAGCCAAGAAAGAGCCTGATGATACACAGCACATGCAGATGACAGATGCTCGGTGCTCAAGATGCACGGAATGTAAGGTCGGAGTGAGGGATATCATTCACGCAGGACATGGCGACCGATATCAGCTGGAATGTACTGCCTGTGGTAATTCCTGGTATGCCTCCCGGGATGCAGTGTCTTTGCTAACTATAGATGGACCAGATTCAGCCAGAAGTGTAGGCACGGCACCGTGGGCCACTGCCAAATTTGAAAATGTTGAGAAGAAGCTGGTTAGTCCCCGTGAATCTGACAAGTCAGCCGAAGATATCTTCAAGAAAACGAGTGAAGCATATATGCCTGTTTTGGAGTCCCAGAAGTCAAGGGCTATGGACTTAATGATGGTAAGAGAGATGAAGATGGATCTCAATGTGAAGTCTTCAGAGGGTTTGAGTCCTGATACTGTTCTTCCATCTCATCAATATCCTTTGAATGCGAAGAAGAgacataaaaaaggaaaaaactttggAAAAGATGAGTTCTTGACCCTCACGGAGGACTTCTCCAAAATCAGATTTGCCAGATTCCGCAGTTCTTCGTGTAAAAGCATTCTCTCTAGACCTAATGGAATGGAAGTCAATATTGAGATGAGGCGAGGTTCGATGTATCAGAGTTCGGAAGAGGTAAAATATAGGAAGAAAATGAGTTCAATGGAGGGAAGGAAGAAAATCGAAATTTCACGAAGCAGCAACACCTCTTTTTCTGGTAGCAGCATTGTTGATTCTTTATGTAGTTCTGATGATGAAGGTCCTAAAAAGAGATCTTCGGTGAAATATAAGAAGGATACAAACTTGAATTCACCATGTATTTCCAGATCATCAGCTTGCATGGACTCCAATTTTCCAGATGGTTTTATTGAAATTTGCATAAATCCAGATGTTAGGGATAGGTATTCTTCTGCAACTGCAGGAAGAGATTCTATAACTTCAAAGGCCAGAAATGATAAAGTTTCTAATAATCCCTTTCTTGAGAAAGGTAGAGTTCATGCATTACACAAGTCATTCTCTCAAAAGGTGGACTTACTATCTCCCTTAGAAAGTGATTGCTCATCAAAAGCCAGTCCAAAAGTCCAATCCACCCCTATCAAGAAAATGTTCAATCCATTCACAAAGTCCAAATCTTTGACGAGCCGGATGGTGGAAACTAGTGAGGTCAAATCAACCGGGACAGTAAACATTACAAGAAACAGGACTTACCAGAAATCTCTACAAAATGACTTCTCTAACACAGCAAAGCATTCTGATATTATTTCTGAGTTTATCAATAGAGATATCCAGCATTCAGGCATTGCAAGTTCACCTGTCCACCTACATGGTAATCTCAAGCTAGAAAACACACATGGGGTTCCTTCTTTTGAGTTCAAGGTGAAATGCCCTGAAGATATATTAGTGGCCAAGAAATGGAGAGCAGATAATAGTGCTTTCAATTGGGTATATACCTTTCACTCCATTGATGGTAGAAAGAAGAGTGAGGCCAATGGCTTGGGATCCCATGATTGTGATACAGGTTCCTCAATTGTAGCACAGATGCTAGTTTCTTGTAACTTATGTTCACAACTAAAAGATGGAGCCTttgacaacaacaacaactcTGTGACGACAGAATTTGTGTTGTATGACCTTGCAAACACAAGACAAAGTGTTTCACTTCAAAGGGATTCTTGTTGTGACCAAGATGATTCTAAAACTTCAAAGGCTTCCCGTGAGCTAGATGAGGAAAGTTTTGCAATTAAGAACAAACTTCCACTTGAGCTTTTATCTGGTAGTGAATTGCATCCAAAACATGAAAGTGCTGCCATTGTTTTGCAAATTCCATTTCATAAGAGAGAGAGTTTGAAAAACACCAGATGGAATAGAAAAAGTGATAAAGCCCATCCTGGCCTAATCAGCCATTCTATggtagaaaagagaagaaagagccTTCATGACATCAGAAGCCAAGAACAGGTGAAAGTGGTAATTCCAAGAGGCAATCACGGTCCTCCGATCGCTGAAAGTCACGGTCCCTCACGATTACTTGATCGATGGAGACATGGTGGAGGTTGTGACTGTGGCGGCTGGGACATGGCCTGTCCCCTTATTCTTTTAGGCAATCCTGGTATTCAATTTTCTGAGGACCATTCTCTTATGGACAATTATCAACCATTGGAACTTTTTGTTCAGGGAGCAAAACAAAATTGTCCTACTTTCAGCATGAAAGTAGTTGAAGAAGGGCAATATGCTGTTGATTTTCATGCACAACTATCCACATTACAAGCCTTCTCCATTTGTATTGCTGTTCTACATGGCACTTGTACTTTCCACGGCGGCGCCGGGCACGAAAAAAAGCAACACTTATCGCATTGCGGATCATTGAAAATGCTTATTGAGGATGAAGTAGAGTTCTTGATAGATTCAGTTCCAACAGAGAAGACAAAATCCAAGATTCCAAAAGGAAATCCTAGGCCGTTTGTGATAAACCCACCTTTTTCTCCTATAGCAAGAGTGTAA 3954 0.4019 MGNRRFTQVDTSDDEDEAPLRSQHQRQQQQQSSASEENRSKLRKRKKMKLPEEEDDERDDEEKKKKRKEKQKEEEGSQSVDEDEEQPQEDAKPIGDPIRVSGKGRGRRKHYESFEFDGNQYTLEDPVLLVPEDKEQKPYVAIIKEITQSQNGSMMVTGQWFYRPEEAERKGGGSWQSRDTRELFYSFHRDEVPAESVMHKCVVHFVPINKQLPNRKQHPGFIVQKVYDTVERKLWKLTDKDYEDNKQQEIDDLVHKTLKRIVDLPDIETEEAPADQEDQMKNKRSFRKRNISPLDVSREDEATPRNEQQLKPETPGSCVNNASEHYQILANLKVLTGDAHRDKWLERLLQSIQYMCNSGDSLQKDDKAKDNSDAINHGSNNGISVTANDCQDKDQKSSKSFIWPDDVVPAIVALEKASHDTLSSDFQKYNQKLRQLVFNLKNKTNLARRLLNGELEPSKILNMSPNELKEGLTAEEIAKKEPDDTQHMQMTDARCSRCTECKVGVRDIIHAGHGDRYQLECTACGNSWYASRDAVSLLTIDGPDSARSVGTAPWATAKFENVEKKLVSPRESDKSAEDIFKKTSEAYMPVLESQKSRAMDLMMVREMKMDLNVKSSEGLSPDTVLPSHQYPLNAKKRHKKGKNFGKDEFLTLTEDFSKIRFARFRSSSCKSILSRPNGMEVNIEMRRGSMYQSSEEVKYRKKMSSMEGRKKIEISRSSNTSFSGSSIVDSLCSSDDEGPKKRSSVKYKKDTNLNSPCISRSSACMDSNFPDGFIEICINPDVRDRYSSATAGRDSITSKARNDKVSNNPFLEKGRVHALHKSFSQKVDLLSPLESDCSSKASPKVQSTPIKKMFNPFTKSKSLTSRMVETSEVKSTGTVNITRNRTYQKSLQNDFSNTAKHSDIISEFINRDIQHSGIASSPVHLHGNLKLENTHGVPSFEFKVKCPEDILVAKKWRADNSAFNWVYTFHSIDGRKKSEANGLGSHDCDTGSSIVAQMLVSCNLCSQLKDGAFDNNNNSVTTEFVLYDLANTRQSVSLQRDSCCDQDDSKTSKASRELDEESFAIKNKLPLELLSGSELHPKHESAAIVLQIPFHKRESLKNTRWNRKSDKAHPGLISHSMVEKRRKSLHDIRSQEQVKVVIPRGNHGPPIAESHGPSRLLDRWRHGGGCDCGGWDMACPLILLGNPGIQFSEDHSLMDNYQPLELFVQGAKQNCPTFSMKVVEEGQYAVDFHAQLSTLQAFSICIAVLHGTCTFHGGAGHEKKQHLSHCGSLKMLIEDEVEFLIDSVPTEKTKSKIPKGNPRPFVINPPFSPIARV 1317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3243 1317 Pfam BAH domain 120 236 IPR001025 GO:0003682
Sto6g3243 1317 Pfam Domain of unknown function (DUF3527) 922 1251 IPR021916 -
Sto6g3243 1317 SMART BAH_4 119 238 IPR001025 GO:0003682
Sto6g3243 1317 MobiDBLite consensus disorder prediction 1 107 - -
Sto6g3243 1317 SMART mid_6 373 478 IPR003618 GO:0006351
Sto6g3243 1317 MobiDBLite consensus disorder prediction 274 307 - -
Sto6g3243 1317 MobiDBLite consensus disorder prediction 269 319 - -
Sto6g3243 1317 Gene3D - 322 470 IPR036575 GO:0006351
Sto6g3243 1317 Gene3D - 83 254 IPR043151 -
Sto6g3243 1317 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 597 - -
Sto6g3243 1317 MobiDBLite consensus disorder prediction 8 22 - -
Sto6g3243 1317 SUPERFAMILY Elongation factor TFIIS domain 2 334 469 IPR036575 GO:0006351
Sto6g3243 1317 ProSiteProfiles BAH domain profile. 119 238 IPR001025 GO:0003682
Sto6g3243 1317 Pfam Transcription factor S-II (TFIIS), central domain 336 487 IPR003618 GO:0006351
Sto6g3243 1317 MobiDBLite consensus disorder prediction 37 77 - -
Sto6g3243 1317 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 597 - -
Sto6g3243 1317 ProSiteProfiles TFIIS central domain profile. 340 496 IPR003618 GO:0006351
Sto6g3243 1317 MobiDBLite consensus disorder prediction 362 385 - -
Sto6g3243 1317 Coils Coil 58 78 - -
Sto6g3243 1317 CDD BAH_plant_3 101 247 - -
Sto6g3243 1317 MobiDBLite consensus disorder prediction 692 714 - -
Sto6g3243 1317 MobiDBLite consensus disorder prediction 692 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3243 Sto-Chr6 38855923 38867791 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3243 - - cam:101501082 1562.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3243 6 38855923 38867791 Sto6g3243 6 38855923 38867791 ECH