Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3242 ATGTCTGGACGCAGTAATTCACCTAAAACTGATCAGCATTCGATCAAATATAATAGAATTCTACATCGGGGTCCATCCTTTAAAGTTGATCTTTCTTGTGTAAAATGTAAACCCACTCTTTCCCATAATGAGAGTAAGCAGTGCTACAAAAATTCTGATCTGAAGTCCCAAGAAATACTGAGCACGGCTCGACTCATCTCTGCAATAGGCCATATATGGGATTCTGCAAGTCAGTCACTTTTATGTTTTGACCCCAAGGAAAATGTGAACCAAGATGATAAAGGCTTCCCAAAAGAGGAAGTTTTGGATAACTTTGGTGAGAAAATAATTGGCAGGGCATATACTTCAAATGATACTTATTACATTCCTATTAATATGAGGACTACTAGCTATGTTTCATCCACTATGCAGGCAAACATGGATATCCCTAAGGTGACACAGAAAATATTTGCACATGAATCTTGTAATGGAAGTCGAGATTACATTCGTTCTTTATTCCAAAAATTTTTGTGGAACAGTATAAACATTTCATATGAACCTTGGACAGAAAAGGAGCTTGTCAGTGAGGAAATCTCATGTAAATTTGGAAATATGTATTGGTGGATGAGTAGGAATGCTTCTAAAGGACTAAAGTGTCCTGTCAAAGTTGCTGAACCTGAGAGCATGAAAATTGCCGTGTCAGTAGATGCAAGCACCCCTGCATTGGCTAATGAGGTTGATGAGTGCAAATCTGATGTAATCATAAGTGATGGTCTATCATCATCTACTGATGCAATGATGGACAAGATAGAAGTTACATCTCTGTCTTCAGACTACTTTCTTAAAGCTGTGCATGATACTGCAACAGATGTTGGTGTTTGTCAGACCCTGTCTTCTAGTACCTGTTCAGATTATCATATGAACTCTTTAGCTACATGTCATAGTACTTCTGTGGGGTGCCAAATTGTGATTGATGATAATGAATTGTTCACCAAACAGAGACATTTCTCAGATACAATAACTGATGATGAATCTAAGGTTGAGGTCTCCTCAGAAAAAGAGAAACCTTATTATTCCCTTGCCAAGCAAGAACATGCATTTTCTGGGGCATTGGCTGGTGCATGTGTTAGCCTCTGTCTACATCCTGTTGACACAATTAAGACAATCATTCAGTCATGCCGTGCTGAAAAGAAGTCTATATTTTACATTGGCCAATCAATTGTTTCTGATAGAGGTGGTTGTGCAAGCGTTGCCACCTCTTCTATTTTTACTCCTAGTGAGCGGATAAAGCAGCAGATGCAGGTTGGTTCTCATTATCGCAACTGCTGCAATGCATTGGTTGAAATTATCAGAAAGGGTGGTTTTCATTCACTATATACTGGTTGGGGAGCTGTACTGTGCCGGAATGTCCCACATTCAATTGTCAAGTTAGCTTGTGGAGGATTAGCTGGATCTACTGCTGCTTTTGTCACCACCCCTTTTGATGTGATTAAGACAAGATTACAGACACAGgTCTTCAAAGTGAGCATTTTTGACATCAAGAGGGTTTCTGTGAGAAGTCTGGCAGACCCACCCCGGATTAGCAAGCAAGGTGGTTCATAA 1581 0.3966 MSGRSNSPKTDQHSIKYNRILHRGPSFKVDLSCVKCKPTLSHNESKQCYKNSDLKSQEILSTARLISAIGHIWDSASQSLLCFDPKENVNQDDKGFPKEEVLDNFGEKIIGRAYTSNDTYYIPINMRTTSYVSSTMQANMDIPKVTQKIFAHESCNGSRDYIRSLFQKFLWNSINISYEPWTEKELVSEEISCKFGNMYWWMSRNASKGLKCPVKVAEPESMKIAVSVDASTPALANEVDECKSDVIISDGLSSSTDAMMDKIEVTSLSSDYFLKAVHDTATDVGVCQTLSSSTCSDYHMNSLATCHSTSVGCQIVIDDNELFTKQRHFSDTITDDESKVEVSSEKEKPYYSLAKQEHAFSGALAGACVSLCLHPVDTIKTIIQSCRAEKKSIFYIGQSIVSDRGGCASVATSSIFTPSERIKQQMQVGSHYRNCCNALVEIIRKGGFHSLYTGWGAVLCRNVPHSIVKLACGGLAGSTAAFVTTPFDVIKTRLQTQVFKVSIFDIKRVSVRSLADPPRISKQGGS 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3242 526 Gene3D Mitochondrial carrier domain 405 513 IPR023395 -
Sto6g3242 526 SUPERFAMILY Mitochondrial carrier 357 500 IPR023395 -
Sto6g3242 526 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 1 405 - -
Sto6g3242 526 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 405 498 - -
Sto6g3242 526 ProSiteProfiles Solute carrier (Solcar) repeat profile. 397 479 IPR018108 -
Sto6g3242 526 Gene3D Mitochondrial carrier domain 326 404 IPR023395 -
Sto6g3242 526 Pfam Mitochondrial carrier protein 469 497 IPR018108 -
Sto6g3242 526 Pfam Mitochondrial carrier protein 405 471 IPR018108 -
Sto6g3242 526 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 405 - -
Sto6g3242 526 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 405 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3242 Sto-Chr6 38850422 38854267 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3242 359 496 EF-hand Containing Proteins AT2G35800 25.481 2.62e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3242 - - gmx:100812271 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3242 6 38850422 38854267 Sto6g3242 6 38850422 38854267 ECH