Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3229 ATGCCGCCTTTTGCAGCATCCAACCCCCTCCCATCTTCTCCACCCAAACCCGATTCCAACATAGTCACCATCGATGTGGGTGGCCAATTCTTCCAAACCACCAAGCAGACTCTCAATTCCGCTGGCCCCAAATCCTTCTTCGCTAAAATCTCCGAATCCCAATTCTCCACACCCTTCATCGATAGAGACCCCGAGTTGTTCTCCATCCTTCTTTCCCTTCTACGAACAGGTAATCTTCCTTCCAAAGCCAAAGCCTACGATATGCAAGATCTGATGTCAGAGTCCCAATTTTACGGTATCGAAAACCTTTTGATGAATTCCCTATCCAGCCCTTCTCAATTCGAGCCCTTCAATCTCGAGAGATCGGTTATTTTGCCTCTCAACGGCCGGGATACTCCCTCCGCCATCGCCTCCACGCGGTTCGGTGCAGTTCATGTCGCGCACGGCAGCAAGATAACGTCCTTCGATTGGTCCCTTCGACGCAAGTCGACGTTTCTGACCCAATTCTCCGCCGTGGATTCTCTATTGGCGCTTTCGTCCTCCGTGGTGGCTGCCGGCGCCACCGACTTCTCAGGGATGCAAATTATTGATCTGAAAAGGGGGTTTGTGAAGACGACCATAGAGTGGGAGAACGTGACCAGGTCTGGTTCCACCGTCCAAGCAATTGGATCTTCGCCGGAGTACCTCTTCACGAGTTTCGAATCGGGTCGGCGCAATTCGAATTCGATCATGGTGTATGATTTACAGAGCTTAACCCCTGTCACAGAGATTTCTCACAACGAGATTTTTGGTGCGGAGATCGATTCCGCCGTCCCAGCAACGAAATTGAAATGGGTTTCGGGTTACAATTTGCTTATGGCGTCTGGGTCGCACAGTGGTCCTTCAGGGGTATCGGGCAACATAAGGTTATGGGATGTCCGGTCTGAAAATGTTGTTTGGGAACTGAAAGAGAAGTCGGATTGTTTCGCGGATGTGACGGTTTCGGATAATCTTTCGGTGATCTTCAAGGTTGGGGTGCATTCAGGTGAGGCGTATTTTGTGGATTTGCGTAAATTAAGTGCTGGGAATTCGTGGGTTTGTCTTGGTGAGGAAAAGAAAGTGACGAATGGGAAGAAGGAAGGCATAGGATGCAAGGTTGAAGATCATGGGAATCAGGTGTTTTGCAGCAAGGGAGGGAATGTAGAATTGTGGTCAGAGGTTATAATGGGGAATGCAAAGAATGGGGAGGGAAGGTCAGAAGAAAGGATATTGAAGAAGAACTTGATGGGTAGAGTGAAGGACATGGGAGGCCATAAGATCACCAATTTGGCCTTTGGAGGGAATAAGATGTTCTTGACTAGGAAGGATCAGCAATGTGTTGAGGTTTGGCAGAGTTCTACAAGGGAATTTTGA 1392 0.4892 MPPFAASNPLPSSPPKPDSNIVTIDVGGQFFQTTKQTLNSAGPKSFFAKISESQFSTPFIDRDPELFSILLSLLRTGNLPSKAKAYDMQDLMSESQFYGIENLLMNSLSSPSQFEPFNLERSVILPLNGRDTPSAIASTRFGAVHVAHGSKITSFDWSLRRKSTFLTQFSAVDSLLALSSSVVAAGATDFSGMQIIDLKRGFVKTTIEWENVTRSGSTVQAIGSSPEYLFTSFESGRRNSNSIMVYDLQSLTPVTEISHNEIFGAEIDSAVPATKLKWVSGYNLLMASGSHSGPSGVSGNIRLWDVRSENVVWELKEKSDCFADVTVSDNLSVIFKVGVHSGEAYFVDLRKLSAGNSWVCLGEEKKVTNGKKEGIGCKVEDHGNQVFCSKGGNVELWSEVIMGNAKNGEGRSEERILKKNLMGRVKDMGGHKITNLAFGGNKMFLTRKDQQCVEVWQSSTREF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3229 463 PANTHER PROTEIN BINDING PROTEIN 16 460 - -
Sto6g3229 463 Gene3D - 135 463 IPR015943 GO:0005515
Sto6g3229 463 SMART BTB_4 20 115 IPR000210 GO:0005515
Sto6g3229 463 Gene3D Potassium Channel Kv1.1; Chain A 12 115 IPR011333 -
Sto6g3229 463 SUPERFAMILY POZ domain 19 106 IPR011333 -
Sto6g3229 463 SUPERFAMILY WD40 repeat-like 147 456 IPR036322 GO:0005515
Sto6g3229 463 CDD BTB_POZ_KCTD-like 22 98 - -
Sto6g3229 463 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 16 460 IPR045068 -
Sto6g3229 463 Pfam BTB/POZ domain 22 107 IPR003131 GO:0051260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3229 Sto-Chr6 38779006 38780397 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3229 - - gmx:100797171 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3229 6 38779006 38780397 Sto6g3229 6 38779006 38780397 ECH