Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3227 ATGGCACGCTTGGTTCTGCCATCCAAGACTATGGCTTTCTCAAGGAAGAGTCTTCTGGGTTTGATCTCCACTGCTCCTCTTCAGGCAACCTACCGCCTTAACTGTTTTGGGAATACAGCAAAGAATAGCATCAGATTTAGGCAATTCCTTGCTTCAGAGGTTTGCACTTTGCACTGTATTATCTGCAAATTCATACaagatatatttattAGGGTTAAGCAAGTGAACAGGAGGCTAATTTGTTCGGTTGCCACAGAGGACTTGCCAAAGCAAGTTGAAGAATCTAAAATGGAGGCACCAAGAGAAATATTCTTGAAGGATTACAAGCAGCCTGATTACTACTTCGACACTGTGGATCTGAGATTTACCTTGGGTGAGGAGAGCACAAAAGTTAGTTCAAAAATTACTGTGTTTCCTCGCACTGAAGGTTCTTCTCCCCCACTTGTTTTGGACGGACAAGACCTAAAGTTGGTTTCTGTTCAGCTGAATGGCAAGGCACTGAAGGAGGGAGATTACCATTTGGATGCACGTCATCTAACTATCCAATCACCTCCTAGTGGTAAATTTGATCTAGAAATTGTAAACGAGATCTACCCACAGAAAAACACATCATTGGAGGGACTTTACAAGTCATCTGGAAATTTCTGTACTCAATGTGAGGCAGAGGGATTtcgtaaaattacattttatcaGGATCGACCTGATATAATGGCAAAATATACATGTCGCATTGAGGCCGATAAATCACTGTATCCAGTGTTGTTGTCTAACGGAAACCTCATTGAGCAAGGTGACTTGGAGAATGGAAAGCATTATGCTGTTTGGGAGGACCCATTCAAGAAGCCTTGCTATTTGTTTGCTTTGGTTGCCGGGCAATTACAGAGCAGAGATGATACATTTATCACCCGCTCAGGACGGAATGTGTCCCTGAGGATTTGGACCCCTGCAGAAGACCTACCCAAGACTGCACATGCAATGTATTCACTTAAGGCAGCCATGAAGTGGGATGAAGACGTTTTTGGTCTTGAATACGACCTGGATCTCTTCAATATCGTTGCTGTCCCTGATTTTAACATGGGAGCCATGGAAAACAAGAGTTTGAATATCTTCAATTCTAAGCTTGTTTTGGCATCTCCAGAAACTGCTAGTGATGGGGATTATTCTGCTATATTGGGGGTTATTGGCCATGAgTATTTCCACAACTGGACTGGCAACAGAGTGACATGTCGTGACTGGTTCCAGCTTAGCCTGAAGGAAGGTCTTACTGTTTTTCGTGATCAGGAATTTTCAGCTGACATGGGAAGCCGAACTGTTAAGCGTATTGGTGATGTTTCAAGACTTAGAAATTACCAGTTTCCACAgGATGCAGGTCCCATGGCTCATCCCGTGCGACCACACTCTTACATCAAGATGGACAACTTCTACACTGATTTCATGTATCAGGGGGCTGAAGTTGTCAGAATGTACAAAATCTTGCTGGGAAGTCCTGGATTTCGAAAAGGCATGGATTTGTACTTCAAAAGACATGATGGACAAGCTGTAACATGTGAAGATTTTTTTGCTGCAATGCGAGATGCAAATGATGCAGATTTTGCAAATTTCTTACATTGGTACTCTCAAGCTGGGACCCCTTTTGTCAAAGTAAATTCTTCTTACAATCCAGAAGCACATacttttactttaaaatttagTCAAGAGATTCCACCTACTCCAGGGCAGCCAGTTAAGGAACCCATGTTCATTCCTGTGACAGTAGGTTTGCTTGATTCAACTGGCAAGGACATTCCTCTTTCAACTATATATCATGATGGAACTTTGCAGTCTGTCTCAAGCAATGGTCAACCTGTCTACAGCACAGTTCTTCGATTCACCAAGAAAGAAGAAGAGTTTGTTTTCACTGATATATTTGAGAGGCCTGTTCCATCTATATTACGGGGATACAGTGCTCCAATCCGTCTTGAATCTGATCTTACTGACAGTGACCTGTTTTTCCTACTGGCTAATGATTCAGATGAATTCAACCGTTGGGAGGCCGGGCAAATTCTAGCACGCAAGCTGATGCTGAACTTGGTAGATGATTTCCAACATAACAAACCGTTGGTTCTGAATCCCAAGTTTGTAGATGGTTTCAAAAGTATTCTATCTGACTCAAGTCTGGACAAAGAATTTGTGGCAAAAGCAATAACTTTGCCTGGAGAGGGAGAAGTAATGGACATGATGGAGGTTGCAGATCCCGATGCTGTTCATGCTGTACGAACTTTCATCAAGAAGCAGCTTGCAAATGAACTGAGAGCAGAGTTCCTCAGCACGGTTAAAAATAATAGTAGCTCAGAAGAATATGTATTTAATCATCCCAACATGTCAAGGCGTGCTCTGAAGAATATTGCTATTGGATATCTTGCATGCCTTGAGGATCCAGAAACCACCGACCTTGTGCTACATGAGTATAAAACTGCTACGAATATGACTGAGCAGTTTGCAGCTTTGGCAGCCATAGCCCAGAACCCTGGTAAAACTCGTGATGACGTACTTGCTGACTTCTATGGCAAGTGGCAGCATGACTTCTTGGTGGTGAATAAATGGTTTGCCCTTCAAGCAATGTCTGACATTCCTGGTAATGTTGAGAATGTTAAGAAACTGTTAAATCACCCAGCATTCGACCTGCGCAATCCAAACAAAGTGTACTCGCTCATTGGAGGTTTCTGTGGGTCTCCGGTTAACTTCCATGCAAAGGATGGATCAGGCTACAAGTTTTTGGGAGAAATTGTGCTGCAACTAGACAAACTCAACCCTCAGGTTGCCTCACGAATGGTGTCAGCCTTCTCAAGATGGAGACGTTACGACGAAAACAGACAAAAACTTGCCAGGGCCCAGCTGGAGATGATTATGTCAACCAATGGACTGTCAGAGAATGTGTTTGAGATTGCCTCCAAAAGTTTAGCTGTTTAA 2949 0.4246 MARLVLPSKTMAFSRKSLLGLISTAPLQATYRLNCFGNTAKNSIRFRQFLASEVCTLHCIICKFIQDIFIRVKQVNRRLICSVATEDLPKQVEESKMEAPREIFLKDYKQPDYYFDTVDLRFTLGEESTKVSSKITVFPRTEGSSPPLVLDGQDLKLVSVQLNGKALKEGDYHLDARHLTIQSPPSGKFDLEIVNEIYPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTCRIEADKSLYPVLLSNGNLIEQGDLENGKHYAVWEDPFKKPCYLFALVAGQLQSRDDTFITRSGRNVSLRIWTPAEDLPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDGDYSAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSADMGSRTVKRIGDVSRLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTDFMYQGAEVVRMYKILLGSPGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDADFANFLHWYSQAGTPFVKVNSSYNPEAHTFTLKFSQEIPPTPGQPVKEPMFIPVTVGLLDSTGKDIPLSTIYHDGTLQSVSSNGQPVYSTVLRFTKKEEEFVFTDIFERPVPSILRGYSAPIRLESDLTDSDLFFLLANDSDEFNRWEAGQILARKLMLNLVDDFQHNKPLVLNPKFVDGFKSILSDSSLDKEFVAKAITLPGEGEVMDMMEVADPDAVHAVRTFIKKQLANELRAEFLSTVKNNSSSEEYVFNHPNMSRRALKNIAIGYLACLEDPETTDLVLHEYKTATNMTEQFAALAAIAQNPGKTRDDVLADFYGKWQHDFLVVNKWFALQAMSDIPGNVENVKKLLNHPAFDLRNPNKVYSLIGGFCGSPVNFHAKDGSGYKFLGEIVLQLDKLNPQVASRMVSAFSRWRRYDENRQKLARAQLEMIMSTNGLSENVFEIASKSLAV 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3227 982 Pfam Peptidase family M1 domain 327 536 IPR014782 GO:0008237|GO:0008270
Sto6g3227 982 Pfam Domain of unknown function (DUF3458) Ig-like fold 542 655 IPR035414 -
Sto6g3227 982 Gene3D - 657 981 IPR037144 -
Sto6g3227 982 Pfam Domain of unknown function (DUF3458_C) ARM repeats 659 981 IPR024601 -
Sto6g3227 982 Gene3D - 294 378 - -
Sto6g3227 982 PANTHER BNAC06G01820D PROTEIN 72 478 - -
Sto6g3227 982 PANTHER BNAC06G01820D PROTEIN 481 981 - -
Sto6g3227 982 TIGRFAM pepN_proteo: aminopeptidase N 107 980 IPR012779 GO:0008270
Sto6g3227 982 CDD M1_APN 107 539 - -
Sto6g3227 982 Gene3D Neutral Protease Domain 2 379 541 IPR027268 -
Sto6g3227 982 Pfam Peptidase M1 N-terminal domain 111 285 IPR045357 -
Sto6g3227 982 Gene3D tricorn interacting facor f3 domain 110 293 IPR042097 -
Sto6g3227 982 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 101 291 IPR042097 -
Sto6g3227 982 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 303 548 - -
Sto6g3227 982 PRINTS Membrane alanyl dipeptidase (M1) family signature 275 290 IPR001930 GO:0006508
Sto6g3227 982 PRINTS Membrane alanyl dipeptidase (M1) family signature 357 367 IPR001930 GO:0006508
Sto6g3227 982 PRINTS Membrane alanyl dipeptidase (M1) family signature 393 408 IPR001930 GO:0006508
Sto6g3227 982 PRINTS Membrane alanyl dipeptidase (M1) family signature 412 424 IPR001930 GO:0006508
Sto6g3227 982 PANTHER - 481 981 IPR012779 GO:0008270
Sto6g3227 982 PANTHER - 72 478 IPR012779 GO:0008270
Sto6g3227 982 Gene3D - 542 655 IPR038438 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3227 Sto-Chr6 38760938 38768449 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3227 K01256 - gmx:100775476 1701.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3227 6 38760938 38768449 Sto6g3227 6 38760938 38768449 ECH