Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3218 ATGCTGGAGCCTGACTTATGTTCTTCCCGAGTATTATCACCATTCCGCGAGGAAAGTGGAGATGAAGAACTTTCGGTCCTTCCCAGGCACACTAAAGTTATAGTCACTGGTAATAACAGAACAAAGTCTGTATTAGTGGGACTGCAAGGCGTGGTCAAGAAAGCTGTCGGCCTCGGAGGTTGGCATTGGctgGTATTGAAAAATGGGGTTGAGGTTAAACTGCAAAGGAATGCATTGAGCGTGCTAGAACACCCTACAGGGAATGAAGAAGATGATCTTGATTATGATAACTCCAGCAGTGGATCTGAAATCCATGAAAAGGACAATGATTTTTCTACTAGCATTGAGTTCCACAAGCCCAGCAAGCCTAGAGTTAGACACTCGAGGCCCTATCTTCAGTCTCTGTCATCAAAGTCAAGCAATCGTGGAAGTTACAGAGAAGTCCATTCCATTCTTGCGCCTCAGCCTAGGGTGAACTTGGCAAAAATGGGAACAGGCTCATTGTGGAGATACTGCAGACATTATAACCTTTTTAGCAGCAATTCAAGCCCTTCAAGGGAACAAATGGTAAAAGCTGTGCAGCGTCATTTTGCATTGCAGCTTAAAGTGGAGGAGGTATCAGTAATCAAAGAATTCCTTCGAGGAGCCAAGAGACTGAAGACAATTGACATGCCTTCTGAATGA 684 0.443 MLEPDLCSSRVLSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNEEDDLDYDNSSSGSEIHEKDNDFSTSIEFHKPSKPRVRHSRPYLQSLSSKSSNRGSYREVHSILAPQPRVNLAKMGTGSLWRYCRHYNLFSSNSSPSREQMVKAVQRHFALQLKVEEVSVIKEFLRGAKRLKTIDMPSE 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3218 227 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 164 217 IPR025718 GO:0005515
Sto6g3218 227 PANTHER SAP30 1 221 IPR024145 -
Sto6g3218 227 MobiDBLite consensus disorder prediction 83 141 - -
Sto6g3218 227 MobiDBLite consensus disorder prediction 98 121 - -
Sto6g3218 227 PANTHER OS04G0166600 PROTEIN 1 221 - -
Sto6g3218 227 Gene3D - 136 226 IPR038291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3218 Sto-Chr6 38725468 38727582 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3218 - - qsu:111986061 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3218 6 38725468 38727582 Sto6g3218 6 38725468 38727582 ECH