Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3199 ATGGCTGCCATCTCCAATTCCTTGCCACTGAAGCACGGTCTCTCGCTTTGGTGTCCTCAATCCTCCGCTCTCCATCgacccaacccttcttcttctttactcacATTTAGAACCTTCCGGAGATGTTACGCCGCTTTCGCTAATGACAATAGGGAGTATGTGATTGTTGGTGGTGGGAATGCTGCAGGATATGCTGCTCGGACTTTCGTCGAGCACGGCTTGGCGGATGGACGCCTATGTATTGTGACCAAAGAGGCATATGCGCCTTACGAGCGTCCGGCTTTGACAAAAGCCTATTTATTCCCACAAGATAAGAAGCCTGCGCGCCTTCCTGGATTTCACACTTGTGTTGGATCCGGTGGGGAGAGGCAGACTCCAGAGTGGTATAAAGAGAAAGGGATAGAGATGTTATATGAAGATCCAGTAAAAAGTATTGACATTGAACAGCAAACTTTGACTACAAATTCTGGAAAACTGCTCAAGTATGGCTCGCTTATTATTGCAACAGGAGCTACAGCTTCAAGATTTCCAGAGAAGATTGGGGGAAATCTACCTGGTGTTCACTATATCCGTGATGTTGCAGATGCTGATTCACTAGTTTCATCATTGGAAAAAGCACGCAAGGTAGTTGTTGTTGGAGGTGGTTATATAGGAATGGAGGTTGCTGCTGCAGCTGTTGGTTGGCAACTTGATACAACAATCATATTTCCAGAGGATCATTTATTGCAAAGACTATTCACTCCTTCTCTTGCTCGGAGATATGAAGAACTCTACCAGAAGAATGGTGTCAAAATCTTAAAGGGTTCCTCCATAAAAAGCTTGGAAGCTGGTTCTAATGGTCATGTAGCTTCTGTGAAACTTGGAGATGGATCTACAATAGAAGCAGATactGTAGTTATAGGCATTGGAGCTAAACCTGCAGTGGGTCCCTTTGAGAGGGTTGGTCTGAATACAGAGGTTGGTGGCATACAGGTTGATGGTCTGTTCCGGACAAGTGTTCCTGGAATCTTTGCTATTGGTGATGTAGCAGCTTTCCCATTAAAGATATATAATCGCATTGCACGTGTTGAACATGTGGATCATGCTCGTCGCTCAGCACAGCACTGTGTGAAAGCATTACTCAGTGCACAAACTCACACGTATGATTATCTTCCATACTTCTACTCGAGGGTGTTTGAATATGAAGGAAGCCCCAGGAAAGTTTGGTGGCAATTTTTTGGAGACAACGTTGGGGAAACAGTTGAAGTTGGAAATTTTGATCCTAAAATTGCTACATTCTGGATTGAATCAgGTAAGCTGAAAGGAGTTCTCCTCGAAAGTGGGAGCCCTGAGGAATTTCAGCTGCTACCCACACTTGCCAGAAGTCAGCCTGTGGTTGATAAAGCGAAGCTTCAAAAGGCATCTTCAGTGGAGGAGGCGCTAGACATTGTTAAGGCATCCTTGTAG 1446 0.4398 MAAISNSLPLKHGLSLWCPQSSALHRPNPSSSLLTFRTFRRCYAAFANDNREYVIVGGGNAAGYAARTFVEHGLADGRLCIVTKEAYAPYERPALTKAYLFPQDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMLYEDPVKSIDIEQQTLTTNSGKLLKYGSLIIATGATASRFPEKIGGNLPGVHYIRDVADADSLVSSLEKARKVVVVGGGYIGMEVAAAAVGWQLDTTIIFPEDHLLQRLFTPSLARRYEELYQKNGVKILKGSSIKSLEAGSNGHVASVKLGDGSTIEADTVVIGIGAKPAVGPFERVGLNTEVGGIQVDGLFRTSVPGIFAIGDVAAFPLKIYNRIARVEHVDHARRSAQHCVKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGETVEVGNFDPKIATFWIESGKLKGVLLESGSPEEFQLLPTLARSQPVVDKAKLQKASSVEEALDIVKASL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3199 481 Gene3D - 54 369 IPR036188 -
Sto6g3199 481 PANTHER APOPTOSIS-INDUCING FACTOR 1 28 481 - -
Sto6g3199 481 Gene3D - 386 472 IPR016156 GO:0016491|GO:0050660
Sto6g3199 481 Gene3D - 176 303 IPR036188 -
Sto6g3199 481 PRINTS FAD-dependent pyridine nucleotide reductase signature 54 73 - -
Sto6g3199 481 PRINTS FAD-dependent pyridine nucleotide reductase signature 162 180 - -
Sto6g3199 481 PRINTS FAD-dependent pyridine nucleotide reductase signature 208 226 - -
Sto6g3199 481 PRINTS FAD-dependent pyridine nucleotide reductase signature 295 311 - -
Sto6g3199 481 PRINTS FAD-dependent pyridine nucleotide reductase signature 321 343 - -
Sto6g3199 481 PANTHER MONODEHYDROASCORBATE REDUCTASE, CHLOROPLASTIC/MITOCHONDRIAL 28 481 - -
Sto6g3199 481 SUPERFAMILY FAD/NAD(P)-binding domain 42 373 IPR036188 -
Sto6g3199 481 Pfam Pyridine nucleotide-disulphide oxidoreductase 52 366 IPR023753 GO:0016491
Sto6g3199 481 PRINTS Pyridine nucleotide disulphide reductase class-I signature 52 74 - -
Sto6g3199 481 PRINTS Pyridine nucleotide disulphide reductase class-I signature 208 233 - -
Sto6g3199 481 PRINTS Pyridine nucleotide disulphide reductase class-I signature 296 310 - -
Sto6g3199 481 PRINTS Pyridine nucleotide disulphide reductase class-I signature 336 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3199 Sto-Chr6 38585386 38589408 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3199 159 385 Acyl Lipid Metabolism Gene Families AT1G48030 25.311 5.31e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3199 K08232 - gmx:100819919 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3199 6 38585386 38589408 Sto6g3199 6 38585386 38589408 ECH