Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3191 ATGGGGAAGGGACACTATTGGTGGGTGTGGGGTATGGTCTTGTATGCTTTGGTAGGTCACATTGATATTGGAGTAGCCTTGATGGATGATGAAAAGTCTATGAACTCCTCACATAATTATGACTATGGAGATGCCCTTGCCAAAGCCATCTTGTTTTTTGAAGGCCAACGCTCAGGGAAGTTACCCTCCACCCAAAGAGTGAATTGGAGGGCAGATTCTGCTCTATCAGATGGCAACCTTGAAAATGTGAATCTGGTTGGAGGATACTATGATGCTGGTGACAATGTGAAGTTTGGATGGCCAATGGCATTTACTGTGAGTTTATTGAGTTGGACTGCTATAGAGTACGAGAGTGAGATATCTTCAGTGAAGCAAATGGAATATCTACGTAGTGCCATTCGTTGGGGTTCGGACTTCATACTACGATCTCACTCTTCGCCAACTATTCTCTTCACCCAGCTGTTTGATTTTGCAGACAAATACAGAGGATCTTACTCTGGGTCTTGCCCATTTTACTGTTCATACTCAGGCTACCAGgATGAACTATTATGGGCTGCCTCTTGGCTGTACAAGGCCAGTGGAGAAAGCAAGTATTTGAACTACATAAGGAACAACCAAGGTTGGAGTCAGGCAGTGTCTGAGTTCAGTTGGGATAACAAATTTGTTGGAGCTCAGACACTACTAACACagGAATTCTATGAAGGGAAGAAGGACTTGGGCAAGTTCAAGAATGACGCAGAGTCATTTATATGCGCAGTGATGCCTGGAAGTAGCTCTCTGCAAATTAGGACCACCCCTGGTGGGCTTCTGTATATAAGAGACAATAGTAATTTGCAATATGCCACGAGCTCCACCATGCTGCTTTTTATATTCTCCAACATTCTCCGTACCAATCATATTAATGGAATCCAATGTGGCTCCACGCATTTTACGCCCTCTCAAATTAGAGCCTTCGCAAAGACACagGTGGATTACATACTAGGAAGCAATCCGATGAAGATGTCATATATGGTGGGATTTGGGAGTAAATACCCAAAGCATTTACATCACAGAGGATCCTCCATTCCTTCGATAAAAGTTCACCCAGGGAAGGTGGGTTGTAATGATGGCCACTCAGACTACTACTCTTCCACCAATCCAAATCCAAATGTTCATGTGGGTGCAATTGTTGGAGGCCCAGATGCTAATGACCACTTCAATGATGTCAGATCCGACTATTCTCACTCCGAACCTACCACCTACATCAACGCTGCTTTTCTCCCTTCCCTCGCTGCTTTAATTTCCTAA 1287 0.4398 MGKGHYWWVWGMVLYALVGHIDIGVALMDDEKSMNSSHNYDYGDALAKAILFFEGQRSGKLPSTQRVNWRADSALSDGNLENVNLVGGYYDAGDNVKFGWPMAFTVSLLSWTAIEYESEISSVKQMEYLRSAIRWGSDFILRSHSSPTILFTQLFDFADKYRGSYSGSCPFYCSYSGYQDELLWAASWLYKASGESKYLNYIRNNQGWSQAVSEFSWDNKFVGAQTLLTQEFYEGKKDLGKFKNDAESFICAVMPGSSSLQIRTTPGGLLYIRDNSNLQYATSSTMLLFIFSNILRTNHINGIQCGSTHFTPSQIRAFAKTQVDYILGSNPMKMSYMVGFGSKYPKHLHHRGSSIPSIKVHPGKVGCNDGHSDYYSSTNPNPNVHVGAIVGGPDANDHFNDVRSDYSHSEPTTYINAAFLPSLAALIS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3191 428 PANTHER ENDOGLUCANASE 18-RELATED 8 153 - -
Sto6g3191 428 PANTHER ENDOGLUCANASE 18-RELATED 153 427 - -
Sto6g3191 428 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 325 351 IPR018221 -
Sto6g3191 428 Pfam Glycosyl hydrolase family 9 153 420 IPR001701 GO:0004553|GO:0005975
Sto6g3191 428 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 399 417 IPR033126 -
Sto6g3191 428 PANTHER ENDO-1,4-BETA-GLUCANASE 8 153 - -
Sto6g3191 428 PANTHER ENDO-1,4-BETA-GLUCANASE 153 427 - -
Sto6g3191 428 SUPERFAMILY Six-hairpin glycosidases 39 427 IPR008928 GO:0005975
Sto6g3191 428 Gene3D - 36 153 IPR012341 GO:0005975
Sto6g3191 428 Gene3D - 154 428 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3191 Sto-Chr6 38537078 38539759 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3191 154 428 Glycoside Hydrolase AT4G23560 69.818 3.38e-143 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3191 - - cam:101489803 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3191 6 38537078 38539759 Sto6g3191 6 38537078 38539759 ECH