Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3190 ATGAAGTGCCGATCCGTGGCGTGCATATGGGCAGGCACGCCCCCACCTCACAGGGTTACCGCCGTCACCGCTTTCAGTCAACCACCAATCTTCTACACTGGTGGATCCGATGGCTCCATCATCTGGTGGGCCTTCTCCGATAACAATTCCAACCCGGAAGTTAAAGCAGTCGGTATGTTGTGTGGTCACGCGGCACCCATCACTGATCTTGGTATTTGTAATCCTATGGAAGCAGAAAATAATACCGGCCGTTCAAGTAATTTAGTAGTTAATTCTGCTTCAAGTGATTTTGGTGCAGTAATTAGTGCATGTTCTGATGGCTTCTTGTGTGTCTGGAGTAAAAGCAGTGGTCATTGCCGGTGCAGGAGGAAGTTGCCACCTTGGGTGGGCAGCCCATGCATGATTCGAACATTGACTTCAAGATCAAGATATGTATGTATTGGTTGTTCTTTCATGGACACTGTCCATGTATCAGACCATTATTCCGTGAATTCCATGGAAGGAAGTGAAGGCCCAATGGATAGAGAAACTCAGCCCAGGAAGCCCCCAAAATGCACTATCGTTATTGTTGACACATATTCACTTACTGTTACCCAAACTGTCTTTCACGGAAATCTATTTATTGGCCCTATGAAGTTTATGGCTGTAGTTTCAGATGATAATGATAAAGAGAGGCATTCTATATTCGTGGTTGATTCAGTTGGTAAGCAACAAATGCTTTCAGTATCAAAGGATCCTCATGATCGCAGGGAAAGCTTGGAAAGTTCGGAAAGTTCTGTTTGGACTGAGGGACTTAGTAGTGTGCAACAAATTATTTCCATCACAACCCATGGGAATATTGTTGCTTTTATCTTGAAAGACCGCTGCATATTTAGGTTATTGTCTAGTGATACTAAATTAGGAGAGATTTCTTGTGTGGACACTCTTTTGTGCTCTTATGGGCATCCTACTCAAGCACATGTGACAGGGGGCATGTTTATTGTAAGTGATGGTGCAGGGGGCATGTTGAATGCCCATGAAAATAGTTGCTTGATTCCAGAAAATTTTGCTGTGTGGAACAATAGAGGTTCTGCAATTGTCTATAAAATATCATATCAGAATGAAATTTTTCAATGTGAGCCTCACTCTGAGATTCCTGCTACTTATTATAAGCCTGATGTGAGACTATCCATTTTTTTCTTACAAGTGTATCATTGTCTGCTCCGCATTGAATCAGTTTGCTTTCAATTTGAGGAATCTTCACTATGGAGACCCCATGTCACAATCTGGTCACTGCATCATTTTGATAATGAGCCTGGTAAACTTTACCGGCAATGTAGAATGCTCAGAGAAGGTGTTTCTTTCATTGACTGTTTTGAGAGCCCTACCCCGCTCAAGGGGTTGAATGGTCTAGAGACAGAGTCAACTTCTATTGTCAATagcttaaataattataatgttaACAAGGGACAGATTGTTTCTTCTTCCATGATCATATCAGAGAGCCTTGTTACTCCTTATGCTGTTGTATATGGTTATTTAAGTGGATTAATAGAGCTTGTAAGATTTGATTTGTTTCAGGGGATAAGTTTTGATGGTGTAAGTTCCAAACCTGAGGAAAAGTCAGCTTCATGCAAACAGTACTTCTCAGGGCACACAGGTGCTGTACTTTGTTTGGCAGCTCATCATATGATGGGTAATGCCAAAGGATGGAGTTTTAATCAGGTTTTGGTTTCTGGAAGCATGGATTGCACGGTTCGTATATGGGACCTTGACACTGGCTGTCTTATAATGGTTATGCATCATCATGTGGATCCAGTGCGCCAAATTATTCTTCCCCCGTCTTCGACTAATCGTCCTTGGAGTGATTGCTTCCTTTCAGTTGGAGAGGACTCATGTGTTGCTCTTGTTTCTCTTGAGACTCTGCGGGTGGAGAGAATGTTTCCTGGTCACATGAACTATCCTTCTAAAGTTATATGGGATGGAGCAAGAGGATACATTGCTTGTCTCTGCCAAGCACATTCTGGAACATCCAATGCTACTGATCAATTATACATTTGGGATGTAAAGACAGGGTGCCGTGAGCGAATCGTACGTGGGACAGCTGCACATTCCATGTTTGATCATTTTTGTAATACCATCAGCATGAATTCCATATCTGGCACATTGTTGAATGGAAATACATCAGTTTCTTCATTACGTCTACCAATAGTTGAAGACGGAAGGTTCTCTAAGTCTTCATCCAGTCTGTCAGAGAAATTGGTCACTTCATCTAGGTCATCACCAAGCATTTTAAATGTGACTGAGCTGAATGCTTCCAAAAGTCATCCAGGCaaagaaaataaggataaaGCACTATCATCTTTTCCATCTGCCCATTGGAGTAAGAAGCTTCCAATCAAATGCTCTAGTCCATTCCCTGGTATTGTGGCTTTGAGCTTTGATCTTGCATCATTGATGTTCTCTAATCAGAAGCTTGAGTCCATCATCAATGGAGGTCATGAGCCAGTGAATAACACTTTGAAGCAGCAAGGCATCCAGAAACAAAATCCCAGCCATCATAGTCAAGAAACACATGAAGTCCAGACAGATACTGAAGAGGGGCACGACAAGATTAAGCTATTTGAAGAATATTTACTTCGATTTAGCTTGTCATTTTTACATTTATGGGATGTAGACACAGAGCTTGATAATTTGCTAACAAGAGACATGGAGCTGAGGAGACCGAAAAATTTTGTAGTAGCTTCTGGTCTGCAGGGGGATAGAGGGTCTTTGACGTTAACATTTCCTGGTCAGAGTGCTATTCTTGAGCTCTGGAAATCATCATCTGAGTTTTCTGCAATGAGGTCACTGATGATGGTGTCCCTTGCCCAACGTTTGATTAGTGTGTCTCACGCTGGTTCGGCAGCCAGCAGTTCTTTAGCAGCATTCTATACTCGGAATTTCATGGACAAATTTCCAGATATGAAGCCTCCTTCCTTACAGCTTTTGGTGGCTTTTTGGCAAGCTGAGAGCAAACATGTACGTATGGCAGCACGGTCTTTATTTCATTGCACAGCCTCCCATGCCATCCCACTACCTCTATCCAATTCAAACACTAATGATCCAGCCAATATGAGCTCTCCAGCTGGAAGTAGAGGCAAGGAGCATGGTGATACAAGAGCAGAAAGCATATCTTCTGAGGCAGAAAAACAAGGAATCTCCCAAACTGAGGAATCCAATATAGTTGCATGGCTAGAATCATTTGAACTGCAAGATTGGATTTCCTGTGTTGGGGGTACAAGTCAAGATGCAATGACATCTCACATTATTGTTGCTGCTGCATTGGCAGTCTGGTATCCTAGTCTAGTAAAGCCAAGTCTTTCCACATTAGTTGTTCATCCATTGATGAAGCTGGCTATGGCAATGAATGAGAAGTTTAGTGCCACTGCTGCTGAGCTCCTTGCGGAAGGCATGGAGACTACATGGAAAGAATGCATTGGGCTTGAGATACCTCGTCTAATAGGGGATATTTTTTTCCAAATAGAATTAAGTGGGTCATCTACCAATTTAGCAGCAGAAAATCTAGCTGTATCAGTTTCTATTCAAGAATCTTTGGTTGAGATTCTTCTTCCAAGTTTAGCTATGGCTGATATACCTGGTTTTTTAACTGTGGTAGAAAGCCAAATTTGGTCTACTGCATCTGATTCGCCTGTCCACTTGGTGTCCCTGATGACTCTCATCAGGGTTATGCGTGGTTCTCCAAGAAACTTGGCTCAATACCTTGACAAGGTTAGTAAAGCCACTCATGATACTGCTTCTAGTGGGACAGATCTGCAGGTGGTCAACTTCATTTTACAAACAATAGATCCAAGCAACTCAGTCATGCGGAAGACTTGCTTCCAGAGTTCAATGACTACTTTAAAGGAGGTTATACGTGTATATCCTATGGTTGCTATGAATGATGCATGGACCAGATTGGCAGTTGGAGATGTGATTGGAGAGAATAATAACCCAAGCATCAGGGTTTATGATATGCAAAGTATAACAATGATAAAGGTTTTGGATGCACGTGGGCCTCCTGGACTCCCAAGTTTGCTTGCAGCAACATCAGAGACAATGCTAACTACTGCTATTTCAGCTCTGAGCTTTTCCCCCGATGGAGAGGGGCTGGTTGCTTTTTCTGAAAATGGGCTGATGATCAGATGGTGGACACTGGGATCTGTCTGGTGGGAGAAACTGAGCCGGAACTTTGTTCCTGTCCAGTGCACCAAACTAATTTTTGTTCCGCCTTGGGAGGGATTCTCTCCTAATACATCCAGGTCAAGTATAATGGCCAGCATATTGGGATCTGATGGACAGCCCAGCTTGCAGGAGAATGCTAAGGATTCAGGTCATGGGGACAGTTTGAAACAATTGCTTCATAATCTTGACCTCACTTATAGACTAGAATGGGTTGGTGAAAGGAAAGTACTTCTTACAAGGCATGGCCATGAATTGGGCACATTTCAGTTGTAA 4476 0.4245 MKCRSVACIWAGTPPPHRVTAVTAFSQPPIFYTGGSDGSIIWWAFSDNNSNPEVKAVGMLCGHAAPITDLGICNPMEAENNTGRSSNLVVNSASSDFGAVISACSDGFLCVWSKSSGHCRCRRKLPPWVGSPCMIRTLTSRSRYVCIGCSFMDTVHVSDHYSVNSMEGSEGPMDRETQPRKPPKCTIVIVDTYSLTVTQTVFHGNLFIGPMKFMAVVSDDNDKERHSIFVVDSVGKQQMLSVSKDPHDRRESLESSESSVWTEGLSSVQQIISITTHGNIVAFILKDRCIFRLLSSDTKLGEISCVDTLLCSYGHPTQAHVTGGMFIVSDGAGGMLNAHENSCLIPENFAVWNNRGSAIVYKISYQNEIFQCEPHSEIPATYYKPDVRLSIFFLQVYHCLLRIESVCFQFEESSLWRPHVTIWSLHHFDNEPGKLYRQCRMLREGVSFIDCFESPTPLKGLNGLETESTSIVNSLNNYNVNKGQIVSSSMIISESLVTPYAVVYGYLSGLIELVRFDLFQGISFDGVSSKPEEKSASCKQYFSGHTGAVLCLAAHHMMGNAKGWSFNQVLVSGSMDCTVRIWDLDTGCLIMVMHHHVDPVRQIILPPSSTNRPWSDCFLSVGEDSCVALVSLETLRVERMFPGHMNYPSKVIWDGARGYIACLCQAHSGTSNATDQLYIWDVKTGCRERIVRGTAAHSMFDHFCNTISMNSISGTLLNGNTSVSSLRLPIVEDGRFSKSSSSLSEKLVTSSRSSPSILNVTELNASKSHPGKENKDKALSSFPSAHWSKKLPIKCSSPFPGIVALSFDLASLMFSNQKLESIINGGHEPVNNTLKQQGIQKQNPSHHSQETHEVQTDTEEGHDKIKLFEEYLLRFSLSFLHLWDVDTELDNLLTRDMELRRPKNFVVASGLQGDRGSLTLTFPGQSAILELWKSSSEFSAMRSLMMVSLAQRLISVSHAGSAASSSLAAFYTRNFMDKFPDMKPPSLQLLVAFWQAESKHVRMAARSLFHCTASHAIPLPLSNSNTNDPANMSSPAGSRGKEHGDTRAESISSEAEKQGISQTEESNIVAWLESFELQDWISCVGGTSQDAMTSHIIVAAALAVWYPSLVKPSLSTLVVHPLMKLAMAMNEKFSATAAELLAEGMETTWKECIGLEIPRLIGDIFFQIELSGSSTNLAAENLAVSVSIQESLVEILLPSLAMADIPGFLTVVESQIWSTASDSPVHLVSLMTLIRVMRGSPRNLAQYLDKVSKATHDTASSGTDLQVVNFILQTIDPSNSVMRKTCFQSSMTTLKEVIRVYPMVAMNDAWTRLAVGDVIGENNNPSIRVYDMQSITMIKVLDARGPPGLPSLLAATSETMLTTAISALSFSPDGEGLVAFSENGLMIRWWTLGSVWWEKLSRNFVPVQCTKLIFVPPWEGFSPNTSRSSIMASILGSDGQPSLQENAKDSGHGDSLKQLLHNLDLTYRLEWVGERKVLLTRHGHELGTFQL 1491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3190 1491 MobiDBLite consensus disorder prediction 827 845 - -
Sto6g3190 1491 Gene3D - 497 785 IPR015943 GO:0005515
Sto6g3190 1491 ProSitePatterns Trp-Asp (WD) repeats signature. 570 584 IPR019775 -
Sto6g3190 1491 MobiDBLite consensus disorder prediction 827 860 - -
Sto6g3190 1491 PANTHER RABCONNECTIN-3B, ISOFORM A 1 1491 - -
Sto6g3190 1491 MobiDBLite consensus disorder prediction 1020 1062 - -
Sto6g3190 1491 ProSiteProfiles Trp-Asp (WD) repeats profile. 542 592 IPR001680 GO:0005515
Sto6g3190 1491 MobiDBLite consensus disorder prediction 1020 1034 - -
Sto6g3190 1491 Pfam WD domain, G-beta repeat 538 583 IPR001680 GO:0005515
Sto6g3190 1491 SUPERFAMILY WD40 repeat-like 16 692 IPR036322 GO:0005515
Sto6g3190 1491 SUPERFAMILY WD40 repeat-like 20 291 IPR036322 GO:0005515
Sto6g3190 1491 MobiDBLite consensus disorder prediction 846 860 - -
Sto6g3190 1491 PANTHER RABCONNECTIN-3B, ISOFORM A 1 1491 - -
Sto6g3190 1491 SMART WD40_4 5 44 IPR001680 GO:0005515
Sto6g3190 1491 SMART WD40_4 53 113 IPR001680 GO:0005515
Sto6g3190 1491 SMART WD40_4 535 583 IPR001680 GO:0005515
Sto6g3190 1491 SMART WD40_4 586 631 IPR001680 GO:0005515
Sto6g3190 1491 SMART WD40_4 1357 1391 IPR001680 GO:0005515
Sto6g3190 1491 SMART WD40_4 634 681 IPR001680 GO:0005515
Sto6g3190 1491 Gene3D - 2 176 IPR015943 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3190 K24738 - gmx:100818675 2068.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3190 6 38526388 38535302 Sto6g3190 6 38526388 38535302 ECH