Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3180 ATGAGAGGAAATAATCCTAAGCACGAACGCCGATGGGCGTCCGACAGTGTTCCTGGCAAGGCAATCAGCGCCGGGACTTCACCCGGTACTGACTCCAATTCCGCAGCCGAGGAGTTTGTTGAGGTCACTCTCGATCTTCAAGATGATGACACCATCGTTCTTCGCAGCGTTGAGCCTGCCACTGCGGTCATTAACATCGACGATGTAGTCGCCGCTAGCGGTACTGAAACTCCGGCGTCCGCCTCGAGGTCGCCGACGATCAGAAGGACCTCGTCCAACAAGCTGCGGCAGTTCTCGCAGGAGCTGAAAGCTGAGGCGGTAGCCAAGGCCAGGCAATTCTCACAGGAGCTTAAAGCGGAGCTTCGGCGGTTCTCCTGGAGCCACGGCCATCCATCGCGCACTCTATCGTCTTCCTCTGCTCAGAATGGAATCGCAGGAGTCACCGGAGGTGGTTTCGAAACGGCTTTGGCAGCTCGAGCTCTCAGGAAGCAACGCGCTCAGCTTGATCGGACTCGGCCTGGTGCTCAGAAAGCACTTCGTGGCCTGAAATTTATCAGCAGTAAATCCAATGGTGTCGATGCGTGGAGCCAGGTGCAGAGCAATTTTGATAGGCTTGCTAAAGACGGTTTTCTCCATCGTGCCGATTTTGCGCAATGCATAGGGATGAGAGATTCCAAAGAATTCGCTCAAGAACTATTCGACGCTCTCAGTCGTCGACGAAGAATGAAGATCGACAAAATCAGCAGAGATGATCTTTATGAATTCTGGTCGCAAATTACCGATCAAAGTTTTGATTCGCGGCTCCAGATCTTCTTTGACATGGTGGACAAGAACGAAGATGGTAGAATCACCGAAGAAGAAGTGAAAGAGATAATTATGTTAAGCGCTTCAGCAAATAAGTTATCGAGATTGAAGGAACAGGCTGAAGAATATGCAGCCTTGATCATGGAGGAATTAGACCCTGAAAGACTAGGGTACATCGAGGCATTTTGGGTCATCATTCTGCCACCGCAGCTATGGCAATTGGAAACACTTCTTTTGCAAAAGGACACGTACCTCAGCTACAGCCAAGCTCTAAGCTACACAAGCCAAGCCTTGAGCCAGAACCTTCAAGGATTAAGGAAGAAAAGTCCGATACGGAGAATGAGCCGAACAATCCTCTACTATTTGCAAGAGAATTGGAAGAGACTTTGGGTTTTAACACTCTGGATTTCGATAATGGCTGGACTGTTTACGTGGAAATTCATTCAGTACAAGCGGAAAGATGCCTTTGAGGTCATGGGTTACTGTCTCCTCACGGCCAAAGGTGCAGCCGAGACTCTAAAGTTCAACATGGCACTCATACTCTTCCCCGTTTGTAGAAACACCATAACTTGGCTCAGGTCCACCAAGCTGGCTTACTTTGTTCCTTTCGACGACAACATCAATTTTCACAAGACAATTGCTGCGGCCATTGTGATTGGTGTTATACTTCATGTCGGCGATCACCTTGCTTGTGATTTCCCAAAACTAGTAAGTACGTCTGAAGAAAATTATGAGCGGCGTTTGAATGGTGTATTTGGACTACATAAACCCAGTTATATAGATCTAGTTAAAGGGGTCGAGGGTGTGACTGGAATTTTGATGGTGATTTTTATGGCCATAGCATTCACGCTTGCAACCAAATGGTTCAGGAGAAATCTCATTAAGTTGCCGAAACCATTTAGTAGGCTAACTGGCTTCAATGCATTCTGGTATTCACACCATCTGTTTGTCATTGTCTACGTCTTGCTCATCATCCACGGTCAATTTCTTTATCTCGTGCAAAAGCGGCTATGGTACAAGCGAACGACATGGATGTATCTTGCGGTTCCAGTTTTACTTTATGCGGGAGAAAGAACACTCAGATTCTTTCGCTCTGGTTTCTATACTGTGCGTCTTATAAAGGTTGCCATTTATCCTGGAAATGTTCTCACATTGCAAATGTCTAAGCCACCACAATTTCGTTACAAAAGCGGACAATACATGTTTGTGCAATGTCCAGCTGTTTCTCCCTTTGAGTGGCATCCATTTTCAATTACCTCAGCCCCTGGTGATGACTACTTGAGTGTTCACATACGGCAACTGGGTGACTGGACACAGGAGCTTAAAAGGGTATTTTCAGAGGCCTGCGAGCCTCCAGTAGCTGGCAAGAGTGGGCTTCTTAGGGCTGATGAAACTACTAAGAAAAGTCTGCCGAAGCTTAAGATAGACGGACCTTATGGTGCGCCAGCTCAAGATTATAGGAAGTATGATGTCTTGTTACTAGTCGGTCTTGGGATAGGAGCAACGCCTTTCATCAGCATTCTGAAAGACCTGCTCAACAACATTATCAAAATGGAGGAACTGGCGGATTCAGTCTCTGATTTTAGTAGAAGTTCAGAACACAGTGTTGGGAGTACAGATTCACCATCTCTAAATAAAATTTCTCCAAAACGGAAGAAAACACTGAAGACTACAAATGCATATTTCTACTGGGTTACGAGAGAGCAGGGTTCTTTTGATTGGTTCAAAGGGGTCATGAATGAAGTAGCCGAACTTGATCAAAGgGGTGTCATTGAGATGCACAATTACTTGACTAGCGTATATGAGGAAGGGGATGCAAGATCGGCCCTCATCACCATGGTACAAGCCCTCAACCATGCCAAAAATGGTGTTGATATCGTTTCCGGGACTAGGGTGAGAACTCATTTTGCTCGGCCTAACTGGAAGAAAGTTTTCTCTAAAATATGTTCGAAGCACTGCAATGGACGAATAGGGGTATTCTATTGTGGCGCACCAGTTTTGGCCAAAGAACTTAGCAAGCTCTGCTATGAGTTCAACGAAAAAGGTCCAACAAAATTTGAGTTCCACAAGGAACACTTCTAG 2886 0.4619 MRGNNPKHERRWASDSVPGKAISAGTSPGTDSNSAAEEFVEVTLDLQDDDTIVLRSVEPATAVINIDDVVAASGTETPASASRSPTIRRTSSNKLRQFSQELKAEAVAKARQFSQELKAELRRFSWSHGHPSRTLSSSSAQNGIAGVTGGGFETALAARALRKQRAQLDRTRPGAQKALRGLKFISSKSNGVDAWSQVQSNFDRLAKDGFLHRADFAQCIGMRDSKEFAQELFDALSRRRRMKIDKISRDDLYEFWSQITDQSFDSRLQIFFDMVDKNEDGRITEEEVKEIIMLSASANKLSRLKEQAEEYAALIMEELDPERLGYIEAFWVIILPPQLWQLETLLLQKDTYLSYSQALSYTSQALSQNLQGLRKKSPIRRMSRTILYYLQENWKRLWVLTLWISIMAGLFTWKFIQYKRKDAFEVMGYCLLTAKGAAETLKFNMALILFPVCRNTITWLRSTKLAYFVPFDDNINFHKTIAAAIVIGVILHVGDHLACDFPKLVSTSEENYERRLNGVFGLHKPSYIDLVKGVEGVTGILMVIFMAIAFTLATKWFRRNLIKLPKPFSRLTGFNAFWYSHHLFVIVYVLLIIHGQFLYLVQKRLWYKRTTWMYLAVPVLLYAGERTLRFFRSGFYTVRLIKVAIYPGNVLTLQMSKPPQFRYKSGQYMFVQCPAVSPFEWHPFSITSAPGDDYLSVHIRQLGDWTQELKRVFSEACEPPVAGKSGLLRADETTKKSLPKLKIDGPYGAPAQDYRKYDVLLLVGLGIGATPFISILKDLLNNIIKMEELADSVSDFSRSSEHSVGSTDSPSLNKISPKRKKTLKTTNAYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTRVRTHFARPNWKKVFSKICSKHCNGRIGVFYCGAPVLAKELSKLCYEFNEKGPTKFEFHKEHF 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3180 961 CDD NOX_Duox_like_FAD_NADP 640 903 - -
Sto6g3180 961 Pfam Respiratory burst NADPH oxidase 167 266 IPR013623 GO:0004601|GO:0050664
Sto6g3180 961 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 633 753 IPR017927 GO:0016491
Sto6g3180 961 MobiDBLite consensus disorder prediction 1 15 - -
Sto6g3180 961 Pfam FAD-binding domain 636 750 IPR013112 GO:0016491
Sto6g3180 961 SUPERFAMILY Riboflavin synthase domain-like 636 749 IPR017938 -
Sto6g3180 961 Gene3D - 748 961 IPR039261 -
Sto6g3180 961 ProSitePatterns EF-hand calcium-binding domain. 276 288 IPR018247 -
Sto6g3180 961 MobiDBLite consensus disorder prediction 20 34 - -
Sto6g3180 961 Pfam Ferric reductase like transmembrane component 436 592 IPR013130 -
Sto6g3180 961 Coils Coil 294 314 - -
Sto6g3180 961 Gene3D - 168 284 - -
Sto6g3180 961 PRINTS Cytochrome B-245 heavy chain signature 537 560 IPR000778 GO:0016020|GO:0016491
Sto6g3180 961 PRINTS Cytochrome B-245 heavy chain signature 739 752 IPR000778 GO:0016020|GO:0016491
Sto6g3180 961 PRINTS Cytochrome B-245 heavy chain signature 762 779 IPR000778 GO:0016020|GO:0016491
Sto6g3180 961 Gene3D Translation factors 625 715 - -
Sto6g3180 961 ProSiteProfiles EF-hand calcium-binding domain profile. 263 298 IPR002048 GO:0005509
Sto6g3180 961 CDD EFh 246 293 IPR002048 GO:0005509
Sto6g3180 961 Pfam Ferric reductase NAD binding domain 757 943 IPR013121 GO:0016491
Sto6g3180 961 PANTHER RESPIRATORY BURST OXIDASE2 27 961 - -
Sto6g3180 961 SFLD NADPH oxidase subgroup (NOX) 100 961 - -
Sto6g3180 961 MobiDBLite consensus disorder prediction 1 34 - -
Sto6g3180 961 SUPERFAMILY EF-hand 194 327 IPR011992 -
Sto6g3180 961 PANTHER NADPH OXIDASE 27 961 - -
Sto6g3180 961 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 755 961 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3180 Sto-Chr6 38446888 38453088 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3180 1 961 Miscellaneous Gene Families AT1G64060 77.950 0.0 1550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3180 K13447 - gmx:100801077 1672.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3180 6 38446888 38453088 Sto6g3180 6 38446888 38453088 ECH