Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3172 ATGCGTGGCCTAACTCTCTCAGAGAGCATGTTCACGCCACATTCACTCTCATCATTTCCCAAACCAttcccttcttttcttcttctttcttcgaATTCTTACTCGAAGAAGCATCATTCAAAACTCCCTCTGCAATTTCCAGTTTTCTCCACGTATGCTAGCCAACGGCATGCGAACATCTTGAAGGAGGGGCCGTGCGGCAATCTACAACAAGGTTTTCTAAAACTGATGGACGAAGGGAAATTTAGTAATGTTTACAAGAATCGCAGAGCAATAGGCAACTGCAATAATTCAGATCAATCAGTTGCTGAGAACTTCAATAGGGAATGTCAAATAGCCTCAGATAGTGTTTCTTCTGATAATTCATCCAATGGACTCCTGAAGTTTATGCTTTTGTTTGGTTTGCTCACACTTCAAGACTCCTATCCAGCTGCTGCTTCAGATTTGGCCAGTGGGTTCAATTCAGTTCCTATCTTGGGGGATTTTGGTGACTTAAGCACAGGTTTTGCTTCAGCTTTCCTGCTAATTTTTTTCTCGGAACTGGGAGATAAGACCTTTTTCATTGCAGCACTTTTAGCCGCTAGGAATTCAGCTGCTGTTGTTTTCATTGGGACATTTGGTGCACTTGCGGCAATGACTCTTGTATCTGTTGTTCTGGGAAGAACTTTTCATTACGTTGATGAAATATTACCATTCAGGTTTGGTGAGACTGATTTGCCGGTTGATGACATTGCTGCTGTTGGCCTATTGGTATATTTTGGGGTCTCTACCCTGCTTGATGCCTCATCTAGTGATGGCCAAAAGTCAGAAGATGAACAGAAGGAGGCAGAGCTAGCAGTTTCAGAATTTTCAGGAAATGGTGCTGGGATCCTATCTGCTGCTAGCACAGTTGTCAGCACTTTCCTCCTAGTTTTTGTTGCTGAATGGGGagataaatcatttttttctaCAATTGCCCTTGCAGCTGCGTCTTCACCCCTTGGAGTCATTGCCGGATCACTTGCTGGACATGGTGTTGCAACTTTGCTAGCTGTTCTGGGAGGCTCTTTACTTGGGACATTTTTATCAGAGAAGGTCATTGCCTACATTGGAGGTGTCCTCTTTCTGGTCTTTGCTGCAGTAACCTTATTTGAAATTGTGAGTTAA 1146 0.4206 MRGLTLSESMFTPHSLSSFPKPFPSFLLLSSNSYSKKHHSKLPLQFPVFSTYASQRHANILKEGPCGNLQQGFLKLMDEGKFSNVYKNRRAIGNCNNSDQSVAENFNRECQIASDSVSSDNSSNGLLKFMLLFGLLTLQDSYPAAASDLASGFNSVPILGDFGDLSTGFASAFLLIFFSELGDKTFFIAALLAARNSAAVVFIGTFGALAAMTLVSVVLGRTFHYVDEILPFRFGETDLPVDDIAAVGLLVYFGVSTLLDASSSDGQKSEDEQKEAELAVSEFSGNGAGILSAASTVVSTFLLVFVAEWGDKSFFSTIALAAASSPLGVIAGSLAGHGVATLLAVLGGSLLGTFLSEKVIAYIGGVLFLVFAAVTLFEIVS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3172 381 Pfam Uncharacterized protein family UPF0016 171 254 IPR001727 -
Sto6g3172 381 Pfam Uncharacterized protein family UPF0016 299 372 IPR001727 -
Sto6g3172 381 PANTHER PROTEIN PAM71, CHLOROPLASTIC 92 381 - -
Sto6g3172 381 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 92 381 IPR001727 -
Sto6g3172 381 ProSitePatterns Uncharacterized protein family UPF0016 signature. 180 189 IPR001727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3172 Sto-Chr6 38378625 38383813 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3172 - - lang:109331470 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3172 6 38378625 38383813 Sto6g3172 6 38378625 38383813 ECH