Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3151 ATGGAGGCTTCAGCAGCAACCTTGTCGCGCATAGGACTAGCGGGGCTCGCCGTCATGGGCCAAAACCTAGCCCTCAACGTCGCCGAGAAAGGCTTCCCTATCTCCGTTTACAATCGCACCACTTCCAAAGTCGACGAGACTGTAGATCGGGCTCGCCAAGAAGGTGCACTTCCCCTCTTCGGTCAGTACAACCCTCGAGATTTTGTCCTCTCTATTCAGCGACCCAGATCAGTCATTATCCTCGTCAAGGCCGGTGCTCCTGTTGACCAAACCATTGCTGCCCTCTCCGAACACATGGAATCCGGCGACTGCATCATCGACGGCGGTAACGAGTGGTACGAGAACACCGAGCGTCGAATTCAAGAAGTTTCCAACAGAGGTATACTCTATTTGGGGATGGGTGTATCTGGTGGCGAAGATGGTGCTCGTAATGGGCCGTCTTTGATGCCTGGCGGTTCCTACGAGGCCTACTCCAACGTCAAAGACATATTGATGAAAGTGGCTGCTCAGGTGGAGGATGGCCCTTGTGTTACTTACATTGGCGAGGGTGGGTCCGGAAATTTCGTCAAGATGGTCCACAACGGTATTGAATACGGAGATATGCAACTGATTTCTGAGGCTTATGACGTGTTGAAGCACGTCGGTGGTCTGTCAAATTCAGAGCTTTCCGAGATTTTCTCTGAATGGAACAGAGGAGAACTTGAAAGTTTCCTGATTGAAATTACAGCCGACATTTTCAAAGTTAAGGACGAAGCTGGAGATGGGTATTTGGTGGATAAGATTTTGGATAAAACAGGCATGAAGGGTACTGGAAAATGGACTGTACAACAGGAGGCAGGACTGCACGATGGGGTGGTATCTGTGAAGAGTGGGATTGATAAGAAGCGACTGATAGATGATGTAAGGCAAGCTTTGTATGCTTCAAAGATATGTAGCTATGCTCAGGGGATGAATTTATTGAGGTCCAAGAGTGATGAGAAAGGTTGGAATTTGAATTTGGGTGAATTGGCGAGGATTTGGAAAGGTGGGTGTATTATTAGAGCAGTGTTTCTTGATAGGATTAAGAAAGCTTATCAGAGGAATCCCAAGTTGGCTAGTTTGATAGTAGACCCAGAATTTGCAAAGGAGATGGTGCAAAGGCAAGCAGCATGGAGAAGAGTTGTGGGATTAGCTATATCAGCTGGGATCAGCACTCCAGGGATGTGTGCTAGTCTTGCTTATTTTGATACATATAGGAGGGCAAGGCTTCCTGCCAATCTTGTTCAAGCTCAGAGGGATTTGTTTGGAGCTCATACCTATGAGCGCATTGATCGACCTGGTGCTTTTCATACTGAGTGGACTAAACTTGCTCGCAACAGCACTGCTGGAGTTGGTTCTCTTCATTAA 1386 0.4769 MEASAATLSRIGLAGLAVMGQNLALNVAEKGFPISVYNRTTSKVDETVDRARQEGALPLFGQYNPRDFVLSIQRPRSVIILVKAGAPVDQTIAALSEHMESGDCIIDGGNEWYENTERRIQEVSNRGILYLGMGVSGGEDGARNGPSLMPGGSYEAYSNVKDILMKVAAQVEDGPCVTYIGEGGSGNFVKMVHNGIEYGDMQLISEAYDVLKHVGGLSNSELSEIFSEWNRGELESFLIEITADIFKVKDEAGDGYLVDKILDKTGMKGTGKWTVQQEAGLHDGVVSVKSGIDKKRLIDDVRQALYASKICSYAQGMNLLRSKSDEKGWNLNLGELARIWKGGCIIRAVFLDRIKKAYQRNPKLASLIVDPEFAKEMVQRQAAWRRVVGLAISAGISTPGMCASLAYFDTYRRARLPANLVQAQRDLFGAHTYERIDRPGAFHTEWTKLARNSTAGVGSLH 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3151 461 Gene3D - 188 288 IPR013328 GO:0016491
Sto6g3151 461 PRINTS 6-phosphogluconate dehydrogenase signature 9 32 IPR006183 GO:0004616
Sto6g3151 461 PRINTS 6-phosphogluconate dehydrogenase signature 74 103 IPR006183 GO:0004616
Sto6g3151 461 PRINTS 6-phosphogluconate dehydrogenase signature 127 152 IPR006183 GO:0004616
Sto6g3151 461 PRINTS 6-phosphogluconate dehydrogenase signature 175 203 IPR006183 GO:0004616
Sto6g3151 461 PRINTS 6-phosphogluconate dehydrogenase signature 257 284 IPR006183 GO:0004616
Sto6g3151 461 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING 3, CHLOROPLASTIC 1 281 - -
Sto6g3151 461 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING 3, CHLOROPLASTIC 276 457 - -
Sto6g3151 461 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE 1 281 IPR006183 GO:0004616
Sto6g3151 461 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE 276 457 IPR006183 GO:0004616
Sto6g3151 461 SMART 6PGD_2 186 447 IPR006114 GO:0004616|GO:0006098
Sto6g3151 461 PIRSF 6PGD 281 455 IPR006113 GO:0004616|GO:0006098
Sto6g3151 461 PIRSF 6PGD 3 289 IPR006113 GO:0004616|GO:0006098
Sto6g3151 461 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 184 449 IPR008927 -
Sto6g3151 461 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 183 IPR036291 -
Sto6g3151 461 Gene3D - 289 414 IPR013328 GO:0016491
Sto6g3151 461 Pfam 6-phosphogluconate dehydrogenase, C-terminal domain 290 446 IPR006114 GO:0004616|GO:0006098
Sto6g3151 461 Pfam 6-phosphogluconate dehydrogenase, C-terminal domain 186 283 IPR006114 GO:0004616|GO:0006098
Sto6g3151 461 Gene3D - 415 448 - -
Sto6g3151 461 Gene3D - 7 187 - -
Sto6g3151 461 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 10 181 IPR006115 GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3151 Sto-Chr6 38204542 38206032 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3151 K00033 - zju:107406734 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3151 6 38204542 38206032 Sto6g3151 6 38204542 38206032 ECH