LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto6g3136	ATGCTCAAGCACCGCTTTAAAGGCTTAGGTGCGATCTTGGGGAGTCAAGTTGATCCTGAAAAAACCGAAGAACTGAAAAAGAACAAAACAGATATTGAGAACATTCTGTCAAAAATCTTGAAACTCATCAAGAACAAGAATGAGGATCAAAGCAAAAGAGAAGGGAGCCCAAACTCCAAAGACGCGAGGACGGAGTCAGAACTTGTGGGACTTATTGAGGAGTTCTACACACAGTACCAGTCACTGTACGCACTGTACGATCGTCTCACCGGAGAGAACGGGAAGGTAGTTTCTCGAAGAATAGAAACCGGAGCTTCTTCTATCTCTTCCTCTAGCTCAGAATCCGATTACTTCTCCTCCGACGAAGTCGATAGTAACCGAAGACCGTTATCTGAAAACGAACATCACACTCAcatcaataataataacaataataatgcaTCAGTATCCGAAGCTACAAGTAACTACAAATTTGAAGCATCGGATCGTGTAAGAGAGTTAGAAGAGCTGTTAAATTGCGAGAAGAAAGAGGTGGAGAGCTTGAAGCAACAGAAATCGGATCTACAGCTTGAAATTGCAACGAAAGCAACTGAATCTGAACAACTTGGCGCCAAAAACAGTGAGATGCATGAGCGAATTTCAGAACTCATCGCACAAACAGAGGGCTTAAGCAACAAGAACAGAGAACTAGAAGCTCAGGTTCAAGGAATGCGAGACGAGAAGGAGGATTATGCAGCGAGAATGAAGGATCTGGAATCAGAATTAGAAAGTCGACGCAATCAGGAAAACGAATTGGAACGGCAGTTGAGAGACAAAAGGTACGAGATTAACGAGCTGAAGGATAGAAACGATGAGCTGAAAAGAGCAATGGCGCACACAGGGGAAGAGATGTCTGCTCTTGCGAAGGAACAGGAGAGCAAGAGAAATGGCGGTTCAATGCAGGTCATTGCTTTAGCAGTTCAAGTGAAGGATCTGAGATTAGAGATAGAGCGTTtgaaggaagagaagagagattTGGAGTTAAAAAAGGAGGAACGGGAGAAGGAATATTCAGAGAGCATAGCGAAGGTATTTGACCAAGGGAAGGTGATAAAGCAGCAGGCAGAGACGATCGAGCGAATGAGTGGGGAGAATGAAGAAGTAAGGATATGGTCCAAGAAGTTCAGGATGAATCGACAATTCACAGAGAGGAGGGTAGAAGAATTAGCTGAAGAGACGCGAAGGCAACTAGAGGATAATATAAGGATATTAAACCAGAGGCTCCACGTGGCAGAGCAGCTCCATAATGAGAACAAAGCATGTTTCAAATTGGCAAAGGAGAGGTACGAGCGAAAGAAGAGAATGCTGAAGGAGAAAATTGCTAGatacgaagaagaagaagccaagGGAGTTGGTATTACCAAACTGGAAATAAAACCAATAGATATTGTGAATGGGTTGGAGTTAGCCGCTGGCAAGATCGAGGAGCACAATGTAGCTTTTATAAATCGTGTGTCTAAAATGGTGGAAGAGGTTGAGACGGCCAGAGATTGGATAAAGGAAAGGAAGGGAGAGGTGAAGCAAGCGAAGGACAAAGTGGAATGCCTCACAGCATTGCTGGATGATAAAGAAGAGCAGGAGTTCCTATTGAGGGAGAAGGTGTGGAACTTGGAGGCTAAGGTGAGTAAAGAAGGAGGGGAGAAGCTGAATCTAACGAAATCAGTAAGCCAGCTTGAGAAGAAAGTCGCAAGATTGGAGAATAGCCTGAAAGAGAAGGAGGAAGAGTTGGTGAATCTTGGGGAGATGAAAAAGGAAGCAATAAGGCAGCTTTGTTTCCTCAATGATTATCATCGCAGTCGTTGTGACTATCTCAAGGATTATATCTCTAAGACCCGGACAATCACAAGACCTTAA	1893	0.4247	MLKHRFKGLGAILGSQVDPEKTEELKKNKTDIENILSKILKLIKNKNEDQSKREGSPNSKDARTESELVGLIEEFYTQYQSLYALYDRLTGENGKVVSRRIETGASSISSSSSESDYFSSDEVDSNRRPLSENEHHTHINNNNNNNASVSEATSNYKFEASDRVRELEELLNCEKKEVESLKQQKSDLQLEIATKATESEQLGAKNSEMHERISELIAQTEGLSNKNRELEAQVQGMRDEKEDYAARMKDLESELESRRNQENELERQLRDKRYEINELKDRNDELKRAMAHTGEEMSALAKEQESKRNGGSMQVIALAVQVKDLRLEIERLKEEKRDLELKKEEREKEYSESIAKVFDQGKVIKQQAETIERMSGENEEVRIWSKKFRMNRQFTERRVEELAEETRRQLEDNIRILNQRLHVAEQLHNENKACFKLAKERYERKKRMLKEKIARYEEEEAKGVGITKLEIKPIDIVNGLELAAGKIEEHNVAFINRVSKMVEEVETARDWIKERKGEVKQAKDKVECLTALLDDKEEQEFLLREKVWNLEAKVSKEGGEKLNLTKSVSQLEKKVARLENSLKEKEEELVNLGEMKKEAIRQLCFLNDYHRSRCDYLKDYISKTRTITRP	630

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto6g3136	630	PANTHER	COP1-INTERACTIVE PROTEIN 1	213	626	-	-
	Sto6g3136	630	PANTHER	COP1-INTERACTIVE PROTEIN 1	27	219	-	-
	Sto6g3136	630	Gene3D	-	158	315	-	-
	Sto6g3136	630	ProSiteProfiles	Networked (NET) actin-binding (NAB) domain profile.	2	93	IPR011684	GO:0003779
	Sto6g3136	630	Pfam	KIP1-like protein	14	87	IPR011684	GO:0003779
	Sto6g3136	630	Coils	Coil	512	539	-	-
	Sto6g3136	630	Coils	Coil	385	427	-	-
	Sto6g3136	630	Coils	Coil	157	198	-	-
	Sto6g3136	630	Coils	Coil	315	356	-	-
	Sto6g3136	630	MobiDBLite	consensus disorder prediction	104	119	-	-
	Sto6g3136	630	Coils	Coil	213	303	-	-
	Sto6g3136	630	MobiDBLite	consensus disorder prediction	120	135	-	-
	Sto6g3136	630	Pfam	Filament-like plant protein, long coiled-coil	21	307	IPR008587	-
	Sto6g3136	630	Coils	Coil	561	602	-	-
	Sto6g3136	630	Coils	Coil	432	462	-	-
	Sto6g3136	630	PANTHER	MYOSIN HEAVY CHAIN-LIKE PROTEIN	27	219	-	-
	Sto6g3136	630	PANTHER	MYOSIN HEAVY CHAIN-LIKE PROTEIN	213	626	-	-
	Sto6g3136	630	SUPERFAMILY	Myosin rod fragments	175	289	-	-
	Sto6g3136	630	MobiDBLite	consensus disorder prediction	104	149	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto6g3136	Sto-Chr6	38141487	38143552	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto6g3136	-		-	aprc:113855752	456.062

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto6g3136	6	38141487	38143552	Sto6g3136	6	38141487	38143552	ECH