Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3118 atggACAAGCTTGCAAAACTCATTTGCCTGTCTCAAGTCCTTCTGGTTTTCCTACCATTTGCTCTTGCTGGTCATGACTACGGCCAAGCTCTGAGCAAGAGCATTCTCTTCTTTGAAGCACAGAGATCTGGTTTTCTTCCCCACAACCAGAGAGTCACATGGAGGAGTCATTCTGGTCTGCACGACGGCAAGGCTAGTGGGGTAGATCTAGTTGGTGGGTACTATGACGCAGGGGACAATGTGAAGTTCGGTTTGCCCATGGCTTTCACTGTTACAATGTTGTCATGGAGCATTATAGAATACGGGAAGCAAATGGCGTCGAGCGGTGAGCTTGGGCATGCCTTGGAAGCTGTCAAGTGGGGTACCGATTACTTCATCAAAGCCCACCCACAACCCAATGTTCTCTACGGAGagGTGGGAGATGGTAACAGTGATCATTACTGCTGGCAAAGGCCAGAGGACATGACCACCGACCGCAGAGCTTACAGGATCGACCCCAGCAACCCCGGCTcggatcttgccggagaaaccGCCGCTGCTATGGCCGCCGCCTCCATTGTCTTCCGACACTCTAACCCGTCTTATTCCGCCGAGCTGCTCCGCCACGCCTACCAgCTATTTGACTTTGcggacaaatacagagggaaatATGACAGCAGTATCACTGTGGCCCAAAAGTACTACCATTCCATCAGCGGCTACAATGACGAATTGCTGTGGGCTGCTGCATGGTTGTATCAAGCAAGTAACAACCAGTATTACTTGGATTACCTTGGAAGAAACGGAGATTCCATGGGTGGAACTGGTTGGTCCATGACTGAATTTGGTTGGGACGTCAAGTATGCTGGTGTTCAGACTTTGGTAGCCAAGTTCCTAATGCAAGGCAAAGCTGGTCATAATGCCCCAGTGTTTGAGAAATACCAGCAGAAGGCAGAGTACTTCATGTGTTCCTGCCTTGGTAAGGGCACTCGCAATGTTCAGAAAACTCCAGGTGGCCTCATATTCCGCCAGAGATGGAACAACATGCAGTTTGTCACAAGTGCATCTTTCCTAGCCACTGTCTACTCCGACTACCTTGTTTCCTCCTCCGGCAGATACTTGAGATGCCCTTCCGGCAATGTCCCTCCAGCTCAGCTTCTGTCCCTTGCTAAATCCCAGGTTGACTACATCCTCGGAGACAACCCAAGAGGTACCAGTTACATGGTCGGCTATGGAAGAACCTTCCCTCAACGAGTTCACCACAGAGGCTCTTCAATTGTTTCCTACAAGGTTAACCCTTCGTTTGTTACCTGCCGTGGAGGTTATGCTACTTGGTTTAGCAGGAAAGGAAGTGACCCTAATCTTCTTACTGGTGCTCTTGTTGGTGGACCTGATGCTTATGACAACTTCGCTGATGAAAGAGATAATTATGAGCAGACGGAACCTGCAACATATAACAATGCTCCTCTTATTGGCATCCTAGCCAGACTCAATGCTGGTCATGGTGCCTTTAACCAGCTCCTTCCAGGGTTTTCCTCTGCAGTTTCATCTTCAGGGCCAATTTCGATTGAGCAGAAGATGACAACTTCGTGGGTTTCCAATGGAAGAACTTACTACAGGTACTCAACAGTGGTGACTAACAAGTCTGGGAAGACTCTCAAGTCTATCAATCTTTCAATATCCAAGCTTTATGGTCCAATCTGGGGACTGAACAAGTCTGGGAATTCCTACACCTTCCCTTCATGGCTCAACTCTTTATCAGCTGGAAAGAGCCTTGAGTTTGTGTACATCCATTCTGCTTCTCCAGCAGATGTGTCTGTTGCCAACTACTTGTTGGGCTGA 1821 0.475 MDKLAKLICLSQVLLVFLPFALAGHDYGQALSKSILFFEAQRSGFLPHNQRVTWRSHSGLHDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMLSWSIIEYGKQMASSGELGHALEAVKWGTDYFIKAHPQPNVLYGEVGDGNSDHYCWQRPEDMTTDRRAYRIDPSNPGSDLAGETAAAMAAASIVFRHSNPSYSAELLRHAYQLFDFADKYRGKYDSSITVAQKYYHSISGYNDELLWAAAWLYQASNNQYYLDYLGRNGDSMGGTGWSMTEFGWDVKYAGVQTLVAKFLMQGKAGHNAPVFEKYQQKAEYFMCSCLGKGTRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLVSSSGRYLRCPSGNVPPAQLLSLAKSQVDYILGDNPRGTSYMVGYGRTFPQRVHHRGSSIVSYKVNPSFVTCRGGYATWFSRKGSDPNLLTGALVGGPDAYDNFADERDNYEQTEPATYNNAPLIGILARLNAGHGAFNQLLPGFSSAVSSSGPISIEQKMTTSWVSNGRTYYRYSTVVTNKSGKTLKSINLSISKLYGPIWGLNKSGNSYTFPSWLNSLSAGKSLEFVYIHSASPADVSVANYLLG 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3118 606 Gene3D - 24 493 IPR012341 GO:0005975
Sto6g3118 606 Pfam Carbohydrate binding domain CBM49 514 591 IPR019028 GO:0030246
Sto6g3118 606 SUPERFAMILY Carbohydrate-binding domain 510 599 IPR008965 GO:0030246
Sto6g3118 606 PANTHER ENDOGLUCANASE 13 572 - -
Sto6g3118 606 SUPERFAMILY Six-hairpin glycosidases 24 495 IPR008928 GO:0005975
Sto6g3118 606 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 389 415 IPR018221 -
Sto6g3118 606 Pfam Glycosyl hydrolase family 9 27 487 IPR001701 GO:0004553|GO:0005975
Sto6g3118 606 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 463 481 IPR033126 -
Sto6g3118 606 SMART CBM49_2 514 594 IPR019028 GO:0030246
Sto6g3118 606 PANTHER ENDO-1,4-BETA-GLUCANASE 13 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3118 Sto-Chr6 38052620 38056107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3118 1 605 Glycoside Hydrolase AT1G64390 77.778 0.0 997
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3118 K01179 - gmx:100801949 1078.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3118 6 38052620 38056107 Sto6g3118 6 38052620 38056107 ECH