Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3116 ATGGAAGAGAAGAGATATATCATAGAGGTAGAGAAAGCAAAGGAGGGAAGGCCATCCATAGGGCCAGTGTATCGTAGCCTTTTTGCTAAGCATGGATTTCCAGCTCCTATCAACGGTCTTAATTCTTGCTGGGATGTTTTCCGCATGTCTGTTGAGAAATATCCCAAGAATCCCATGCTTGGTCGGCGGGAAATCATTGAGGGGAAGGCTGGTAATTACAAGTGGCAAAGTTATGAAGAAGTATATGACTTGGCAATGAAGGTTGGAAATTCCATTCGTAGTTGTGGTTATGAGAAAGGTGTGAAGTGTGGTATTTATGGTGTCAATTGCCCAGAGTGGATTATAAGCATGCAgGCCTGCAATGCTCATGGGCTTTATTGTGTACCTTTATATGATACCTTAGGTGCTGGGGCTGTAGAATTTATTATATGCCACGCAGAGGTCTCAATTACTTTTGCAGAAGAAAAGAAGATTCCTGAGCTACTGAAGACCCTTCCTATTGCAGCAAAGTATCTAAGGACACTTGTGAGCTTCGGAAAGGTTACAACTGAACAAAAGCAACAAGTTGAAGAGTTTGGTTTGGCAATTTACTGTTGGGACGAATTTCTCCAATTGGGTGATGGTCAGAGTTTTGATCTTCCTGTGAAGAAGAAAAGTGATATCTGCACAATAATGTATACAAGTGGAACAACCGGTGACCCCAAGGGAGTTTTGTTATCCAATGACAGCATTATGACCTTCTTAGCCGGTGTCAAGCGACTGTTTGAGAGTGTAAATGAACAAGTGAATGAGAAGGATGTATATCTTTCATATCTTCCACTTGCACATATCTTTGATAGGGTCATTGAGGAGCTATTTATATGGCATGGTGCCTCCATAGGTTTCTGGCGTGGGGATGtcaaattattaattgaagACATTGGGGAGTTAAAACCATCTATTTTCTGTGCTGTGCCACGTGTGCTCGAACGAGTGTACTCAGGTTTGACACAGAAGATTTCTTCAGGAGGCTTCTTAAAGCACAAATTGTTTAATTTAGCTTACTCATACAAGTTGCATAAAATGAACAAAGGTCGAAAGCATGAAGAAGCATCTCCAATTTTTGACAAAATAGTGTTCAAAAAGGTAAAGCAAGGTTTAGGAGGCAATGTTCGTATTATTCTATCTGCAGCAGCACCTCTAGCTACACATGTAGAAGCTTTCCTTCGTGTGGTGACATGTGCTCATGTCCTACAAGGATATGGTCTGACTGAAACATGTGGAGGAACCTTTGTGTCATTACCAAATGAAGTGAAAATGCTTGGTACTGTTGGTCCTCCATTGCCAAATGTAGATGTGTGCTTAGAATCTGTTCCTCAAATGGGATATGATGCTCTTGCTACCACACCAAGAGGAGAGATTTGTGTTCGTGGAAATACCTTGTTTTCTGGGTACCACAAAAGACAAGACCTCACAAACGAGGTTTTCATTGATGGATGGTTCCATAcagGGGATATTGGAGAATGGCAACCTGATGGAGTGATGAAAATTATTGACCGCAAGAAGAATATATTTAAGCTCTCTCAAGGAGAGTATGTTGCTGTTGAAAACCTGGAGAATATTTATGGTCAAGTTTCTGCTATTGAATCTATATGGATTTATGGGAACAGCTTTGAGTCCTTCCTTGTTGCAGTAGTTAACCCTAAGAGGGAAGCGCTTGAAGGATGGGCAGAAGAAAATGGCATACACAGTGATTTCAATTCTCTGTGTGAAGATTCCAGGGCAAAGAGTTTCATACTTGAGGAACTCACAAAGATTGCCAAGGAAAAGAAGTTgaaaggttttgagtttataaGAGGAATTCATCTTGAAGCGGTGCCTTTTGACATGGAACGTGACCTTATTACTCCAACTTACAAGAAGAAGAGGCCCCAGTTGCTTAAATACTATCAGAATGTCATTGACAACATGTATAAGAATGGAAGCAAACCCGGTGCCTGA 1980 0.4045 MEEKRYIIEVEKAKEGRPSIGPVYRSLFAKHGFPAPINGLNSCWDVFRMSVEKYPKNPMLGRREIIEGKAGNYKWQSYEEVYDLAMKVGNSIRSCGYEKGVKCGIYGVNCPEWIISMQACNAHGLYCVPLYDTLGAGAVEFIICHAEVSITFAEEKKIPELLKTLPIAAKYLRTLVSFGKVTTEQKQQVEEFGLAIYCWDEFLQLGDGQSFDLPVKKKSDICTIMYTSGTTGDPKGVLLSNDSIMTFLAGVKRLFESVNEQVNEKDVYLSYLPLAHIFDRVIEELFIWHGASIGFWRGDVKLLIEDIGELKPSIFCAVPRVLERVYSGLTQKISSGGFLKHKLFNLAYSYKLHKMNKGRKHEEASPIFDKIVFKKVKQGLGGNVRIILSAAAPLATHVEAFLRVVTCAHVLQGYGLTETCGGTFVSLPNEVKMLGTVGPPLPNVDVCLESVPQMGYDALATTPRGEICVRGNTLFSGYHKRQDLTNEVFIDGWFHTGDIGEWQPDGVMKIIDRKKNIFKLSQGEYVAVENLENIYGQVSAIESIWIYGNSFESFLVAVVNPKREALEGWAEENGIHSDFNSLCEDSRAKSFILEELTKIAKEKKLKGFEFIRGIHLEAVPFDMERDLITPTYKKKRPQLLKYYQNVIDNMYKNGSKPGA 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3116 659 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 654 - -
Sto6g3116 659 SUPERFAMILY Acetyl-CoA synthetase-like 39 652 - -
Sto6g3116 659 CDD LC-FACS_euk 71 652 IPR045311 GO:0004467|GO:0006631
Sto6g3116 659 Gene3D - 39 513 IPR042099 -
Sto6g3116 659 Pfam AMP-binding enzyme 50 521 IPR000873 -
Sto6g3116 659 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 4-LIKE 5 654 - -
Sto6g3116 659 ProSitePatterns Putative AMP-binding domain signature. 224 235 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3116 Sto-Chr6 38037410 38041577 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3116 2 653 Acyl Lipid Metabolism Gene Families AT4G23850 73.130 0.0 1041
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3116 K01897 - gmx:100814965 1148.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3116 6 38037410 38041577 Sto6g3116 6 38037410 38041577 ECH