Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3114 ATGTTGAATCTTTTTTCTCTAAGGAGACTGCCATGGGGTTCTGGTACTGGTGGTCAGGAAAAGGTTGAATTAACTGCTGCAGAATTAGAGTCATTTCAATCAGAACTTGCTGATATAAAAGAGAGGGAAGCTCACCTGAAAGCTCAGTTGGAACATATTGATGAAATCCTGAGGTTATCTCGTCTTTTTGGCTATATGTACATCCGCACGAGATGGGCTGCACTACCAGGAGATCCTCCACCTATAGATGATTCTGATGTAGATGATTGGCTTCCTCGCTTTATTGTTCTCCACGGGACAAGTATTTTCATATATTTGTTGACTACAGATCTAAGTCCTCAGGAATCCACTCTTCTATCTGATATTATTGAAGTAGGGAAACTACCAAGTTTCAAACGGGAGGATGGCGAGACACGATatgctttttatattttaactcaTCAAGGACTACGATATGAATGCTCAAGCAGTTCCAAGATACAGGTTGACTCTTGGTTATCAACTTTACAAATTGACCACAAATTGGACTCTCAGGTTTCCAGATCCGCTTCCAGGGCCGTCAGGTCTCTTCTCTCCGCTTCCAAGGGTTCTCGTTTTTACTCCGAAGGGCGCGCGGTAGCTGCTGCTACTGCTGTTTCACTTACAAGAAATGCGCCTTTAATTGCTTCAAATTATGGGAGGTCCGAATCCGGAAGTGGATCCAGACAATGGTTTTCAGGGGCTCTCGCTCTTTCTGCTGCAGCTTACCTGCTCCAAGATCAGGAGGCACATGCTGCTGAGCTGGAGCGCACTTTCATTGCCATTAAGCCCGATGGGGTGCAGAGAGGGCTgATTTCAGAGATTATTTCTCGTTTTGAGCGCAAAGGGTTCAAACTTGTGGGAATTAAAGTATTGGTTCCTTCGAAGGAGTTTGCAAAGAAGCATTATCATGACCTGAAAGAAAGACCCTTCTTCAATGGCCTGTGCGATTTCTTAAGCTCTGGTCCTGTCATTGCGATGGTCTGGGAAGGAGAAGGAGTTATTAGATATGGCCGAAAACTAATTGGAGCCACAGATCCACAAAAATCTGAGCCCGGAACTATTAGAGGTGATCTGGCTGTTGTTGTTGGAAGAAATATCATCCACGGGAGTGATGGTCCAGAGACTGCCAAGGACGAAATTGCGTTGTGGTTTAAGCCAGACGAGTTGGTAAAGTTCACAAGCAACGCAGAGAAGTGGATttatggtgaaaactga 1236 0.4377 MLNLFSLRRLPWGSGTGGQEKVELTAAELESFQSELADIKEREAHLKAQLEHIDEILRLSRLFGYMYIRTRWAALPGDPPPIDDSDVDDWLPRFIVLHGTSIFIYLLTTDLSPQESTLLSDIIEVGKLPSFKREDGETRYAFYILTHQGLRYECSSSSKIQVDSWLSTLQIDHKLDSQVSRSASRAVRSLLSASKGSRFYSEGRAVAAATAVSLTRNAPLIASNYGRSESGSGSRQWFSGALALSAAAYLLQDQEAHAAELERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVLVPSKEFAKKHYHDLKERPFFNGLCDFLSSGPVIAMVWEGEGVIRYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIALWFKPDELVKFTSNAEKWIYGEN 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3114 411 SUPERFAMILY Nucleoside diphosphate kinase, NDK 261 408 IPR036850 -
Sto6g3114 411 Gene3D - 64 173 IPR011993 -
Sto6g3114 411 SMART ndk_5 261 398 IPR034907 -
Sto6g3114 411 Hamap Nucleoside diphosphate kinase [ndk]. 261 396 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Sto6g3114 411 ProSitePatterns Nucleoside diphosphate kinases active site. 372 380 IPR023005 -
Sto6g3114 411 CDD NDPk_I 262 391 - -
Sto6g3114 411 SUPERFAMILY PH domain-like 83 170 - -
Sto6g3114 411 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 178 411 - -
Sto6g3114 411 Pfam Nucleoside diphosphate kinase 262 395 IPR034907 -
Sto6g3114 411 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE-RELATED 178 411 - -
Sto6g3114 411 Coils Coil 22 49 - -
Sto6g3114 411 PRINTS Nucleoside diphosphate kinase signature 264 286 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Sto6g3114 411 PRINTS Nucleoside diphosphate kinase signature 308 327 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Sto6g3114 411 PRINTS Nucleoside diphosphate kinase signature 328 345 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Sto6g3114 411 PRINTS Nucleoside diphosphate kinase signature 349 365 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Sto6g3114 411 PRINTS Nucleoside diphosphate kinase signature 372 391 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Sto6g3114 411 Gene3D - 257 411 IPR036850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3114 Sto-Chr6 38021970 38029058 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3114 K00940 - tcc:18606710 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3114 6 38021970 38029058 Sto6g3114 6 38021970 38029058 ECH