Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3105 ATGACTCTGACCTCGTGCACTCCTTCCTTCTCTcggcttcttcctcctccttctcctctcCCTAAGCTCCATGAAACTTGTGCTATTCAATTCGGTAACACTTCTTTTTTGCCTCTTTTCTCGGGGAGTTTCTCGGTTCCTCTCAACATAACAAAATTCCTTAAGCCTAAAGCTTCTGTGAGCGAGAGCGATCATGAAATTTCTGAAAACAACGTTTTAGAGCATTTGGACCCGCAGTTGCTAGCGAGCGTTGCCGCTGCCAAAGGCGCCAATGAGGCACTGCAGATGATCGCTGAAATGTCTAGAAGAGATGGAGGCGTCGTATGCATCACTGATTGTTGCTCCATTATATCGGCTGCACTTAGTCAGAATAATGTGGAATTGGCCATGTCCGTTTTCTTCGCTATGCGCGCTAGTTTTGATCAAGTTGGTGAGAATGGCCTTAAGAGATGGAAGTGGTCCAGGCCAAACGCACATGTTTACACATTGTTGATTCAGGGCCTTGCATCATCATTGAGGGTTTCTGATGCTCTCAGGGTGATTGAATATATTTGTGAAGTGGCAGTATCTCCTGGTGAGGAGGTACCTTTTGGAAAGATAGTGAGATGTCCTAGTTGTAGGATAGCTGTTGCTGTTGCACAGCCACAACAAGGTATTCAGATAGTATCCTGTGCAAACTGTCGCTACCAATATGAACTTGTTTCTGGTGACATAATCAGTATTCAATCAGAAGAAATCAGCATGGATATTTCACCGTGGGAAAGGGGGTTAAGATTCCTGCAACTGAAGAAGAAAAGCATTCCTGCAGCTGTTCACTCTATTGTGGTGCAGACCCCTTCTGGTATGGCTCGTACACACAGATTTGCAACTGAAACAGTTGATCTGCCAGCACAAGAAGGAGAAAGGGTAACTGTTGCTGTGGCAGCTCCTTCAAATGTCTATAGAGAGGTGGGCCCCTTTAAATTTAGTCCAAGGGCCCCTGATTTCTATCCTGGTGAGGCTATGTGCCTGACAAACCACAAAGATGGTCGAGAATCACTTCTATTAAGAGCCCCAAGTAAAGAAGGAAGCTCATCGTTACTTAAACCCTCCTTCCTCTTTCCTATTCTTGCTGTGTTTGCAACTGGTGATGCTGCATCTGGACTTATTGACCCCAGCCTGCCCCAAGTCCTATCAATTGTTGCAGTTTCATCTCTTGCTGTTGGAGCTACATtgaattcttttgtttttccacAGTTGAATCAGCTTCCTCAAGGATCAGTGGAAGCAACTGCTATCAAACAACGACTTTTATCTCAATATGATGTGCTTCAGTCTCGCATTAAAGACCTAAAAGAAGCTTCTGAAAAAGAGGTTTGGATGTTGGCTCGGATGTGCCAACTGGAGAACAAAATTTCTGCTGTTGGAGAACCTTCTTATAGAGCTCGGAGAAGTAGAATCAAGAGGGTACAAGAGAGCTTGCTAAACTCCCTCAGGGGACGGATTGAATTGATTGACAGCTATGCCAGAATCTCTTCAATGATCGAAATTGAGGTGGAGATGGACACTGATGTTCCTGCTGCTGAAACTGCCAGCAATGCGGATAGTATCATGGATCAGATACAACAAACCATGGAGCTTGAAAATCTAGAAGAGAGATGGAAAATACAAGCTGAAGCCAATGATGAGGCTGAAAGACTCCTTAGCTCGCAGCCCTTACCTTCAGAAGAAATTTAA 1716 0.4336 MTLTSCTPSFSRLLPPPSPLPKLHETCAIQFGNTSFLPLFSGSFSVPLNITKFLKPKASVSESDHEISENNVLEHLDPQLLASVAAAKGANEALQMIAEMSRRDGGVVCITDCCSIISAALSQNNVELAMSVFFAMRASFDQVGENGLKRWKWSRPNAHVYTLLIQGLASSLRVSDALRVIEYICEVAVSPGEEVPFGKIVRCPSCRIAVAVAQPQQGIQIVSCANCRYQYELVSGDIISIQSEEISMDISPWERGLRFLQLKKKSIPAAVHSIVVQTPSGMARTHRFATETVDLPAQEGERVTVAVAAPSNVYREVGPFKFSPRAPDFYPGEAMCLTNHKDGRESLLLRAPSKEGSSSLLKPSFLFPILAVFATGDAASGLIDPSLPQVLSIVAVSSLAVGATLNSFVFPQLNQLPQGSVEATAIKQRLLSQYDVLQSRIKDLKEASEKEVWMLARMCQLENKISAVGEPSYRARRSRIKRVQESLLNSLRGRIELIDSYARISSMIEIEVEMDTDVPAAETASNADSIMDQIQQTMELENLEERWKIQAEANDEAERLLSSQPLPSEEI 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3105 571 Coils Coil 427 447 - -
Sto6g3105 571 Gene3D Tetratricopeptide repeat domain 68 197 IPR011990 GO:0005515
Sto6g3105 571 Coils Coil 540 560 - -
Sto6g3105 571 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 2 570 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3105 - - gmx:100781803 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3105 6 37969557 37976026 Sto6g3105 6 37969557 37976026 ECH