Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3104 ATGGTCGCCAAGACTGTTCTCGTCACCGGTGGAGCCGGTTACATCGGTAGCCACACCGTTCTCCAGCTCTTGCTTGCTGGCTATAAGGCCGTCGTCGTTGATAATCTCGATAATTCTTCTGAAATTGCTGTCCACAGAGTCAGGGACCTCGCCGCCCAATTTGGGGATAACCTCTCCTTTCATAAGGTAGACCTCCGGGACAAAGCTGCACTTGAGCAAATTTTTGCTTCCACAAAATTTGATGCTGTCATACATTTTGCTGGACTGAAAGCAGTAGGAGAAAGTGTGCAGAAACCCTTACTCTACTTCAACAACAACTTGATTGGGACAATCACTCTATTGGAAGTCATGGCTGCCCATGAATGCAAGAAgCTTGTGTTCTCATCTTCAGCTACTGTATATGGTTGGCCAAAGGAGGTTCCATGTACAGAAGAATTCCCCCTCTCAGCAATGAACCCATATGGGCGAACCAAGCTTATCATCGAGGACATTTGTCGTGATATCTACCGTGCAGAGTCTGATTGGAAAATAATATTGTTGAGGTACTTCAATCCTGTTGGTGCACATTCAAGTGGCAATATTGGTGAGGATCCTCGTGGAATTCCAAACAATCTCATGCCATTTGTTCAGCAAGTAGCTGTTGGCAGGCGTCCTGCACTGACAGTTTTTGGAAATGATTATAATACAGTTGATGGCACTGGGGTTCGTGATTACATTCATGTCGTTGATTTAGCAGATGGGCACATTGCTGCAGTGCGCAAACTAGATGATTCTGATATAGGCTGTGAGGTGTATAACTTGGGAACAGGAAAGGGAACTTCAGTGTTGGAGATGGTTAGAGCTTTTGAAAAGGCCTCCGGAAAGAAAATTCCTCTTGTTATGGCTGGCCGGAGACCTGGTGACGCTGAAATTGTTTATGCATCAACCGAGAAAGCAGAAAGGGAACTTAAATGGAAGGCAAAATATGGCATTGATGAAATGTGCCGTGATCAATGGAATTGGGCTAGCAAAAACCCTTTTGGCTATGAATCACAGCCCCAGGAGTCCACCAACTAA 1056 0.4527 MVAKTVLVTGGAGYIGSHTVLQLLLAGYKAVVVDNLDNSSEIAVHRVRDLAAQFGDNLSFHKVDLRDKAALEQIFASTKFDAVIHFAGLKAVGESVQKPLLYFNNNLIGTITLLEVMAAHECKKLVFSSSATVYGWPKEVPCTEEFPLSAMNPYGRTKLIIEDICRDIYRAESDWKIILLRYFNPVGAHSSGNIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGNDYNTVDGTGVRDYIHVVDLADGHIAAVRKLDDSDIGCEVYNLGTGKGTSVLEMVRAFEKASGKKIPLVMAGRRPGDAEIVYASTEKAERELKWKAKYGIDEMCRDQWNWASKNPFGYESQPQESTN 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3104 351 TIGRFAM galE: UDP-glucose 4-epimerase GalE 6 339 IPR005886 GO:0003978|GO:0006012
Sto6g3104 351 Pfam GDP-mannose 4,6 dehydratase 7 330 IPR016040 -
Sto6g3104 351 PANTHER UDP-GLUCOSE 4-EPIMERASE 1 345 - -
Sto6g3104 351 Gene3D - 6 275 - -
Sto6g3104 351 Gene3D - 194 335 - -
Sto6g3104 351 CDD UDP_G4E_1_SDR_e 5 334 IPR005886 GO:0003978|GO:0006012
Sto6g3104 351 PANTHER UDP-GLUCOSE 4-EPIMERASE 5 1 345 - -
Sto6g3104 351 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 342 IPR036291 -
Sto6g3104 351 PRINTS Nucleotide sugar epimerase signature 32 48 - -
Sto6g3104 351 PRINTS Nucleotide sugar epimerase signature 236 251 - -
Sto6g3104 351 PRINTS Nucleotide sugar epimerase signature 262 277 - -
Sto6g3104 351 PRINTS Nucleotide sugar epimerase signature 301 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3104 Sto-Chr6 37956687 37960484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3104 5 319 Miscellaneous Gene Families AT4G00110 26.807 5.95e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3104 K01784 - gmx:100792137 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3104 6 37956687 37960484 Sto6g3104 6 37956687 37960484 ECH