Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3082 ATGCCTGGTTTGGTATCCGTCAAAACGCCGCCGGACGCTCCGCCGCTGCGAATCTCCGTGCCGGAGAGTCAAACGCCACAGAGATCCGACTCCGCTCCGGCTAACTTCAAGACGCCTTCTCCTCTTCCTAAGAAACCGCCGTCTCCTTCACCTTCCCGAGCTAAGCCCTCTCCGGATCGCAAAAAGAAGCTTCCGGACTCTCCCAACCCTGCTTTCTCCGAGGCCTCCCTCGACAACCCCGATCTCGGCCCCTTCCTTCTCAAGCTCGCTCGAGATACCATTGCCTCCGGCGAAGGCCCTGCCAAGGCTCTCGATTATGCAATTCGGGCGTCCAAATCGTTCGAGCGATGTGCGGCTGAGGGTGAGCCCAGCTTGGACCTGGCTATGAGTCTGCACGTCCTGGCTGCTATTTACTGTAGCCTAGGGAGGTTCGAGGAGGCCGTGCCGGTGCTTGAGCGGGCGATCCAGGTTCCTGATGTCGCTAGGGGTGCGGATCACGCGCTTGCTGCTTTCTCGGGTTATATGCAGTTAGGGGATACGTTCTCCATGCTTGGGCAGGTCGATAAGTCGATCTCATGTTATGACGAAGGGCTGAAGATCCAGATCGAAGCATTGGGTGAGACGGATCCGAGAGTAGGAGAAACTTGCAGATACTTAGCTGAGGCCAATGTTCAAGCAATGCAGTTTGATAAAGCAGAGGAACTGTGCAAGAAAACTCTTGAGATTCATCGAGCACACAGTGAACCAGCATCTCTTGAAGAAGCAGCAGATAGAAGGCTTATGGCACTTGTTTGCGAAGCAAAGGGAGATTATGAGTCAGCTCTTGAGCATCTTGTCCTTGCCAGCATGGCAATGATTGCCAATGGGCAAGACAATGAAGTTGCTGCTATTGATGTCAGTATTGGAAACATTTACATGTCTCTTTGTCGCTTTGATGAAGCTATCTTCTCCTACCAGAAGGCGCTTACTGTTTTCAAATCATCAAAAGGTGAAAACCACCCTTCAGTTGCATCTGTTTTTGTACGCCTTGCTGATTTGTATCACAGGACTGGAAAACTGAGAGAGTCGAAATCCTATTGCGAAAATGCTCTGAGAATTTACTCAAAACCAGTTCCTGGAACCACAGCAGAAGAGATTGCTAATGGGTTGACAGAAGTTTCAGCCATTTTTGAATCTGTAGATGAGCCTGAGGAGGCTTTGAAACTCTTGCAAAAGGCGATGAAGTTATTGGAGGATAAACCAGGACAGCAGAGCACAATTGCTGGAATAGAAGCAAGAATGGGCGTGATGTTTTATATGATTGGGAGGTATGAAGAAGCAAGGAACTCCTTTGAGAGTGCTGTAGCAAAACTTAGAGCCAGTGGGGAAAGAAAGTCTGCCTTTTTTGGGGTTGTTTTGAACCAGATGGGATTGGCATGTGTACAACTGTTCAAGATAGATGAGGCTGCTGAGTTGTTTGAAGAAGCTAGGGGAATTCTTGAACAGGAGTGTGGCTCATGCCATCAAGATACTCTTGGAGTGTACAGCAATCTCGCAGCAACTTATGATGCTATGGGAAGAGTGGGAGATGCTATTGAGATCTTGGAGTATGTGCTCAAATTGAGGGAGGAAAAGCTTGGAATAGCAAATCCTGATTTTGAAGATGAGAAGCGAAGGCTGGCTGAGCTTCTGAAAGAAGCAGGCAAGACGAGAGACAGAAAAGCGAAGTCTCTGGAAAACCTCATCGATCCCAGCTCAAAGAGAACAAAGAAGGAGGGAACAAAGAGATGgggttttagaatttaa 1785 0.4846 MPGLVSVKTPPDAPPLRISVPESQTPQRSDSAPANFKTPSPLPKKPPSPSPSRAKPSPDRKKKLPDSPNPAFSEASLDNPDLGPFLLKLARDTIASGEGPAKALDYAIRASKSFERCAAEGEPSLDLAMSLHVLAAIYCSLGRFEEAVPVLERAIQVPDVARGADHALAAFSGYMQLGDTFSMLGQVDKSISCYDEGLKIQIEALGETDPRVGETCRYLAEANVQAMQFDKAEELCKKTLEIHRAHSEPASLEEAADRRLMALVCEAKGDYESALEHLVLASMAMIANGQDNEVAAIDVSIGNIYMSLCRFDEAIFSYQKALTVFKSSKGENHPSVASVFVRLADLYHRTGKLRESKSYCENALRIYSKPVPGTTAEEIANGLTEVSAIFESVDEPEEALKLLQKAMKLLEDKPGQQSTIAGIEARMGVMFYMIGRYEEARNSFESAVAKLRASGERKSAFFGVVLNQMGLACVQLFKIDEAAELFEEARGILEQECGSCHQDTLGVYSNLAATYDAMGRVGDAIEILEYVLKLREEKLGIANPDFEDEKRRLAELLKEAGKTRDRKAKSLENLIDPSSKRTKKEGTKRWGFRI 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3082 594 SUPERFAMILY TPR-like 291 412 IPR011990 GO:0005515
Sto6g3082 594 MobiDBLite consensus disorder prediction 20 36 - -
Sto6g3082 594 Gene3D Tetratricopeptide repeat domain 76 170 IPR011990 GO:0005515
Sto6g3082 594 Pfam MalT-like TPR region 132 282 IPR041617 -
Sto6g3082 594 SUPERFAMILY TPR-like 80 200 IPR011990 GO:0005515
Sto6g3082 594 MobiDBLite consensus disorder prediction 562 594 - -
Sto6g3082 594 MobiDBLite consensus disorder prediction 1 77 - -
Sto6g3082 594 Gene3D Tetratricopeptide repeat domain 171 281 IPR011990 GO:0005515
Sto6g3082 594 Coils Coil 546 566 - -
Sto6g3082 594 Gene3D Tetratricopeptide repeat domain 463 576 IPR011990 GO:0005515
Sto6g3082 594 MobiDBLite consensus disorder prediction 39 54 - -
Sto6g3082 594 PANTHER - 1 590 - -
Sto6g3082 594 SUPERFAMILY TPR-like 133 534 IPR011990 GO:0005515
Sto6g3082 594 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 1 590 - -
Sto6g3082 594 SMART tpr_5 171 204 IPR019734 GO:0005515
Sto6g3082 594 SMART tpr_5 128 161 IPR019734 GO:0005515
Sto6g3082 594 SMART tpr_5 380 413 IPR019734 GO:0005515
Sto6g3082 594 SMART tpr_5 295 328 IPR019734 GO:0005515
Sto6g3082 594 SMART tpr_5 337 370 IPR019734 GO:0005515
Sto6g3082 594 SMART tpr_5 505 538 IPR019734 GO:0005515
Sto6g3082 594 SMART tpr_5 255 288 IPR019734 GO:0005515
Sto6g3082 594 SMART tpr_5 463 496 IPR019734 GO:0005515
Sto6g3082 594 SMART tpr_5 213 246 IPR019734 GO:0005515
Sto6g3082 594 SMART tpr_5 421 454 IPR019734 GO:0005515
Sto6g3082 594 Pfam Tetratricopeptide repeat 465 537 - -
Sto6g3082 594 Pfam Tetratricopeptide repeat 294 368 - -
Sto6g3082 594 Gene3D Tetratricopeptide repeat domain 282 462 IPR011990 GO:0005515
Sto6g3082 594 ProSiteProfiles TPR repeat profile. 295 328 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3082 Sto-Chr6 37813911 37816791 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3082 134 340 Glycosyltransferase AT3G04240 23.849 1.41e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3082 - - mnt:21391217 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3082 6 37813911 37816791 Sto6g3082 6 37813911 37816791 ECH