Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3081 ATGGCGATCGCATCTCCATCGACTCCGAGCTTCTCAGCTTCTTTCTGCTCCACTCGGACCCAATTGATTCGCCTCACGCGCTTCCCCTCCGTCAACTTGTCTCAGTTTCGGAGAAACCAAGCGCACTCTCTAACTCGTCGACTTGTCGTAACGTCCCGTCTCAATTCCTCTAAATCCCCCGATGCTGGTGGCTCTGTCTCCCCGGACAATGGAGATTTTCCCTACGAGCTCCAGCACGATTTTGCGCCTCAGCGTCAGAGGAGCGGATCGCCGGTGTTCATCACGCTCCCAGTCCATGCCGTGGACCGAGAGGGGCGGATCCTGAAGCCGAAAGCTATGACGGTCTCTTTCAGAACGCTCGCAACGGCTGGAGTAGAAGGCGTGGTTTTCGAGATTTGGTGGGGTTTAGTCGAGGGGAATGAGCCTAGGGTTTATAGTTGGCGAGGGTATTTGGAACTCGTCAAGCTTGCCCAGACGTTCGGCTTGAAGGTTCGAGTTGTCCTTGCGTTTCATCAGTTCGGCACGGGCCCTGATGATCCTAATTGGATACCTCTTCCTCAATGGGTGCGTAATGAGATAGAAAAAGATCGAGGATTAGTATATTCAGACAAATCTGGGAAAATAAATGCTGAATACATTTCACTTGGATGTGATGTTCTTCCTGTGCTGTGTGGACGATCTCCCATTCAAGCATATGCGGATTTTATGAGGGATTTCAGGGACACCTTCAGGCCTTATCTTGGCATTATCATAACAGGAGTACAAATTGGTATGGGTCCTGGTAGTGAACTTAGATATCCTCTATGCCCCTCCTATTTACTGCGGGCTTGGCCTCCTGAACATGGAAAGTTTCAATGCTATGATAAGGTTGGTCGAAAATTATACTTCTGGCTTGTAGAGTTGTATTTAATGCTTTATGTGCTCTGGGGAATTTTGGCAATAAGCTATTGGCTAGCTTTATGGAATTGTACAATCATcgtcatttttaatttccacCTTTTTTTCCTTGCTATCTGTCAGTATATGCTTGCATCTCTAAATGCATATGCAAGAGAGACTGGTATGCCTGAATTGGGATATGGCGCTCTGCGTGATGCTGAAGATTTGGTGCACGGCAAAGCGGTGCGGACTTCGTCTTTAAGAAGGGAGGATGATTCTTGGTCCTTGCCACATGGTGAATTTTTTCTTGAATGGTACTCGGGCATGCTGCTCCTGCATGGAGAGAGAATTTGTAGGGAAGCTGAAACTATATTTAGGGGTACAGAAGTCAAACTATCAGCAAAGGTGGCTGCCATTCACTGGCACTATAAGATGGATTTCCATCCATCAGAGTTAAGGGCAGGCTACTACAATACTAAAAACAGGAACGGATACTTACCCATTGCTCGCATGTTTAGTAAGTATGGATTTGGTATGTGTTGCTCATGTTTTGAAATGAACGATGCAATAGAATATAGGATAAACCCAGATGGTAGCCCTGAAGGTCTTCTTAGACAGCTGTTGTTGGCTGCTAGGCTTTATGATATACCACTGGAAGGCCAAAACTATTCATCTAATTTGAATAATATAGCATTCGAGCAGGTGCTGGAGATGTCTAAGTATTACTCAGATGGGATTGAAAAGCGTCCCTTCTCATTCAACCTTGTGAGAATGGAAGCAAAAATGTTTGATTCTCGTTTTTGGATTCCATTTACTCATTTTGTGAGGCAAATGTCTGGTGGGAATACTTTTCGAGCCAGATTAAATTCTGTTGCTGAAGTACGCACTGAAGCAATTAAAGCTTGTATAGTTGACTTTGTGCTCTCGTTTTTGCTAATGCCCATCACATCATCTTCGATTTATTCTGGTTTTAGTATAGAATCACCTCACCTCAGGGGAGGCAGAGTCCATACCCTGAGGATTATGGTGGATCTTGTACCCCAATCCAATGAGATGAAGGGAAGACAGCTTATGAAAGTTGATACCGATGACTACAAATCTGACCCTAACAACAAGAATGataaagggaaagggaaacccCATGATGATGGCAATTGA 2037 0.4423 MAIASPSTPSFSASFCSTRTQLIRLTRFPSVNLSQFRRNQAHSLTRRLVVTSRLNSSKSPDAGGSVSPDNGDFPYELQHDFAPQRQRSGSPVFITLPVHAVDREGRILKPKAMTVSFRTLATAGVEGVVFEIWWGLVEGNEPRVYSWRGYLELVKLAQTFGLKVRVVLAFHQFGTGPDDPNWIPLPQWVRNEIEKDRGLVYSDKSGKINAEYISLGCDVLPVLCGRSPIQAYADFMRDFRDTFRPYLGIIITGVQIGMGPGSELRYPLCPSYLLRAWPPEHGKFQCYDKVGRKLYFWLVELYLMLYVLWGILAISYWLALWNCTIIVIFNFHLFFLAICQYMLASLNAYARETGMPELGYGALRDAEDLVHGKAVRTSSLRREDDSWSLPHGEFFLEWYSGMLLLHGERICREAETIFRGTEVKLSAKVAAIHWHYKMDFHPSELRAGYYNTKNRNGYLPIARMFSKYGFGMCCSCFEMNDAIEYRINPDGSPEGLLRQLLLAARLYDIPLEGQNYSSNLNNIAFEQVLEMSKYYSDGIEKRPFSFNLVRMEAKMFDSRFWIPFTHFVRQMSGGNTFRARLNSVAEVRTEAIKACIVDFVLSFLLMPITSSSIYSGFSIESPHLRGGRVHTLRIMVDLVPQSNEMKGRQLMKVDTDDYKSDPNNKNDKGKGKPHDDGN 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3081 678 SUPERFAMILY (Trans)glycosidases 88 292 IPR017853 -
Sto6g3081 678 PANTHER - 2 587 IPR001554 GO:0000272|GO:0016161
Sto6g3081 678 Gene3D Glycosidases 82 602 - -
Sto6g3081 678 Pfam Glycosyl hydrolase family 14 96 293 IPR001554 GO:0000272|GO:0016161
Sto6g3081 678 Pfam Glycosyl hydrolase family 14 382 562 IPR001554 GO:0000272|GO:0016161
Sto6g3081 678 SUPERFAMILY (Trans)glycosidases 335 586 IPR017853 -
Sto6g3081 678 PANTHER BETA-AMYLASE 2 587 - -
Sto6g3081 678 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 124 138 IPR001554 GO:0000272|GO:0016161
Sto6g3081 678 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 145 163 IPR001554 GO:0000272|GO:0016161
Sto6g3081 678 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 167 188 IPR001554 GO:0000272|GO:0016161
Sto6g3081 678 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 259 281 IPR001554 GO:0000272|GO:0016161
Sto6g3081 678 MobiDBLite consensus disorder prediction 649 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3081 Sto-Chr6 37803887 37809503 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3081 91 578 Glycoside Hydrolase AT4G17090 40.695 4.49e-119 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3081 K01177 - gmx:100787834 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3081 6 37803887 37809503 Sto6g3081 6 37803887 37809503 ECH