Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3078 ATGGAAGAGGAGGAAATATTCTCCCATCGCAATTTGCAAATACGCACTATCCTAATTCCTACCCATCATCATGGTCCATCTGCTCAAAAGAAGTTGAAGATGAGGCTCTTGAAAGTGGCTACTTGTAATCTCAATCAATGGGCAATGGACTTCGATTGCAATACAAAGCACATTAAGGAGTCTATAGCTGAGGCTAAACAAGCCGGCGCTGTCATTAGGCTTGGACCCGAGCTCGAGATTACCGGTTATGGCTGCGAAGACCATTTCTTAGAGCTCGATACTGTTACTCATGCATGGGAATGCTTGAAAGAGATATTGCTTGGTGATTGGACAGATGGCATATTGTGTAGCTTTGGTATGCCTATTATCAAAGGGTCGGAGAGGTATAATTGCCAGGTTATGTGTTTAAATCGAAAGATTATTATGATACGACCAAAGATGTGGCTTGCAAATGATGGCAATTATAGAGAGCTTCGATGGTTTACTGCTTGGAAGCAGAAAGATCAACTTGTGGAATTTCTGCTTCCCAAAGAAATTTCTGAGGCACTAGGTCAAGAATCAGTTCCTTTTGGCTATGGATTCATTCAGTTTCAAGACACAGCGATTGCAGCTGAAGTTTGTGAAGAGCTTTTTACTCCAATCCCCCCTCATACTGAGCTTGCGTTGAATGGTGTTGAGGTATTTATGAATGCAAGTGGAAGTCACCACCAACTTAGAAAGCTTGATGTCCGTCTTCGTGCTTTTATAGATGCCACTCATACACGTGGAGGGGTTTACATGTATAGCAATCACCAAGGATGTGATGGTGGTCGCCTTTACTATGATGGATGTGCTAGTGTTGTGGTAAATGGAGATGTTGTTGCTCAGGGTTCACAATTTTCTTTGAAGGATGTTGAGACTGTGGTTGCTCTAATAGATCTGGATGCGGTTGCAAGCCTTAGAGGGTCTATCAGTAGCTTTCAAGAGCAAGCAAGTTGTAAAACCAAGGTTCCTTCAGTGGCAGTAGCATACAATCTTTGCATGCCTTTTAACCTGAAAGTGTGCCTTTCCATTCCACATAAGATCAAGTATCACTCTCCTGAAGAGGAAATAGCATTTGGACCTGGATGCTGGTTATGGGACTACTTAAGAAGAAGTGGAGCATCTGGTTTTCTGCTTCCTCTATCTGGTGGAGCAGATAGTTCCTCTGTTGCTGCTATTGTTGGATGCATGTGCCAGCTTGTAGTGAAAGATATTGCAAATGGAGATGAAAAAGTTAAAGCTGATGCAATACGAATAGGAAATTATAAAGATGGACAGTATCCTACAGACAGCAGAGAATTTGCTAAACGAATATTCTATACTGTGTTTATGGGATCTGAAAACAGTTCTGAAGACACAAGGTCACGAGCCAAGGTTCTGGCAGATGAAATTGGCTCATGGCACCTTGATGTTAGCATTGATGTGGTTGTATCTGCATTTTTATCATTATTCCAAACACTTACAGGAAAGCGACCACTCTATAAGGTAGATGGTGGATCAAATGTCGAGAATTTAAGCTTGCAGAACATCCAAGCACGAATAAGAATGGTGCTAGCTTTCATGTTAGCGTCACTCTTGCCTTGGGTTCACAACAAACCTGGGTTTTATCTTGTCTTGGGGAGCTCCAATGTGGATGAAGGCTTGCGTGGTTACTTAACAAAGTACGATTGCAGCTCAGCAGATATTAATCCCATTGGAAGTATAAGTAAGCAGGATCTTCGGGCATTTCTGCGATGGGCAGCCATCCATCTTGGTTACTCGTCTTTGAAAGATATTGAAGCAGCTCCACCCACTGCTGAACTGGAGCCTATACGTTCAAACTACAGTCAGCTTGATGAAGTAGATATGGGAATGACTTATGAGGAGCTCTCAGTCTATGGAAGGTTGCGGAAAATTTTCCGCTGTGGTCCAGTTTCCATGTTTCAGAATCTATGCTACAGATGGGGTGCAAGATTGACGCCATCTCAGGTGGCTGAAAAAGTAAAACACTTTTTCAAGTATTATTCTATAAATCGACACAAAATGACTGTATTGACTCCTTCCTATCATGCCGAGAGTTATTCACCAGAGGATAACAGGTTTGATCTGCGCCAATTTCTGTACAATGCAAGATGGCCATATCAATTTCgcaaaattgatgaaattgTTAGTGAGTTAGATGTTAAGAATGTTGCTGTTCAAGAATCAGGAGACCATGAGAAAATGGTAGCTGCATCAGATGGTGTTGGTGGGATGGGAGTTATTGCAGCAGGTTCAGGCAATCCCAAAGTTGGATTTTGA 2301 0.4194 MEEEEIFSHRNLQIRTILIPTHHHGPSAQKKLKMRLLKVATCNLNQWAMDFDCNTKHIKESIAEAKQAGAVIRLGPELEITGYGCEDHFLELDTVTHAWECLKEILLGDWTDGILCSFGMPIIKGSERYNCQVMCLNRKIIMIRPKMWLANDGNYRELRWFTAWKQKDQLVEFLLPKEISEALGQESVPFGYGFIQFQDTAIAAEVCEELFTPIPPHTELALNGVEVFMNASGSHHQLRKLDVRLRAFIDATHTRGGVYMYSNHQGCDGGRLYYDGCASVVVNGDVVAQGSQFSLKDVETVVALIDLDAVASLRGSISSFQEQASCKTKVPSVAVAYNLCMPFNLKVCLSIPHKIKYHSPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKDIANGDEKVKADAIRIGNYKDGQYPTDSREFAKRIFYTVFMGSENSSEDTRSRAKVLADEIGSWHLDVSIDVVVSAFLSLFQTLTGKRPLYKVDGGSNVENLSLQNIQARIRMVLAFMLASLLPWVHNKPGFYLVLGSSNVDEGLRGYLTKYDCSSADINPIGSISKQDLRAFLRWAAIHLGYSSLKDIEAAPPTAELEPIRSNYSQLDEVDMGMTYEELSVYGRLRKIFRCGPVSMFQNLCYRWGARLTPSQVAEKVKHFFKYYSINRHKMTVLTPSYHAESYSPEDNRFDLRQFLYNARWPYQFRKIDEIVSELDVKNVAVQESGDHEKMVAASDGVGGMGVIAAGSGNPKVGF 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3078 766 SUPERFAMILY Carbon-nitrogen hydrolase 34 322 IPR036526 -
Sto6g3078 766 CDD GAT_Gln-NAD-synth 38 325 - -
Sto6g3078 766 Pfam Carbon-nitrogen hydrolase 38 314 IPR003010 GO:0006807
Sto6g3078 766 Gene3D HUPs 360 727 IPR014729 -
Sto6g3078 766 PIRSF NADS_GAT 34 715 IPR014445 GO:0003952|GO:0005524|GO:0009435
Sto6g3078 766 CDD NAD_synthase 359 682 IPR003694 GO:0003952|GO:0004359|GO:0005737|GO:0009435
Sto6g3078 766 Pfam NAD synthase 371 631 IPR022310 -
Sto6g3078 766 PANTHER NH 3 /GLUTAMINE-DEPENDENT NAD + SYNTHETASE 34 765 IPR003694 GO:0003952|GO:0004359|GO:0005737|GO:0009435
Sto6g3078 766 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 353 694 - -
Sto6g3078 766 TIGRFAM nadE: NAD+ synthetase 444 682 IPR003694 GO:0003952|GO:0004359|GO:0005737|GO:0009435
Sto6g3078 766 Gene3D - 28 339 IPR036526 -
Sto6g3078 766 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 37 307 IPR003010 GO:0006807
Sto6g3078 766 PANTHER GLUTAMINE-DEPENDENT NAD(+) SYNTHETASE 34 765 - -
Sto6g3078 766 Hamap Glutamine-dependent NAD(+) synthetase [nadE]. 37 713 IPR014445 GO:0003952|GO:0005524|GO:0009435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3078 K01950 - gmx:100804904 1365.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3078 6 37784755 37793729 Sto6g3078 6 37784755 37793729 ECH