Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3076 ATGCTGGAGAGCCTCAAGCACCTGCTGGGCTACCCAGGCCCGTCGGGCTTCGGGTCCAAGTCCACCGCCGACCAAGTCACCCAATCCTCCTCCCACCTCTCCTCCCTCACCGCCATCATCACCGGAGCGACGTCGGGAATCGGGGCGGAGACGGCGCGGGTCCTGGCGAAGAGAGGCGTGAGGCTGATTCTGCCGGCTCGAACCGTGAAAGCGGCGGAGGAAACGAAGGCTCGCATCCTCTCCGAGTCTCCTGAGTCGCATATCATTGTGATGCCTCTCGATCTCAGCTCTCTCAATTCCGTTCGTACCTTCGTTTCTCACTTCGAATCTCTCGGCTTACCTCTCCATCTTCTCATAAACAACGCCGGGAAGTTCGCGCACGAGCACGCAATCTCCGAAGATGGATTTGAGATGACCTTCGCCACAAATTATCTAGGTCATTTTCTGTTGACAAATTTGTTGTTGAAGAGAATGGTGGAAACGGCGGAGAAGACAGGGGTGCAGGGCAGGATCGTCAATGTCTCCTCCAACATCCACGGGTGGTTTTCCGGCGACATCATCGGATATCTCGCTCTTATAACCCGCACTAAAACGCACTACGACGCCACACGTGCTTATGCTCTATCCAAGCTTGCCAACATATTACACACCAAGCAACTTGCTCTCACTCTTGAGCAAATGAAGGCGAACGTGACAGTGAATAGCGTTCACCCGGGGGTGGTCAGAACCAGACTCACCAGAGACCGTGAAGGCTGGCTCACAGAAGAATCTGAAGTAATTAGGAAGGAATCTGTAAAAATAATGCAGGCAGCTGCAACGACATGTTACGTGGCGACCCATCCAAGGATGATGAATGTGTCTGGGAAGTACTTCTCTGACTGCAACGAAGCTTCCACCTCAAAACTAGGATCCAGTTCTACCCAAGCTACGAGGTTATGGTCCGCTTCTCAATCCATGATTTCTATGGGTCCTAACCCTCTCCTTCAACTTTCTCATCAATAG 1002 0.5269 MLESLKHLLGYPGPSGFGSKSTADQVTQSSSHLSSLTAIITGATSGIGAETARVLAKRGVRLILPARTVKAAEETKARILSESPESHIIVMPLDLSSLNSVRTFVSHFESLGLPLHLLINNAGKFAHEHAISEDGFEMTFATNYLGHFLLTNLLLKRMVETAEKTGVQGRIVNVSSNIHGWFSGDIIGYLALITRTKTHYDATRAYALSKLANILHTKQLALTLEQMKANVTVNSVHPGVVRTRLTRDREGWLTEESEVIRKESVKIMQAAATTCYVATHPRMMNVSGKYFSDCNEASTSKLGSSSTQATRLWSASQSMISMGPNPLLQLSHQ 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3076 333 PANTHER MITOCHONDRIAL PYRUVATE CARRIER 4 321 - -
Sto6g3076 333 PANTHER RETINOL DEHYDROGENASE 4 321 - -
Sto6g3076 333 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 35 297 IPR036291 -
Sto6g3076 333 PRINTS Glucose/ribitol dehydrogenase family signature 37 54 IPR002347 -
Sto6g3076 333 PRINTS Glucose/ribitol dehydrogenase family signature 113 124 IPR002347 -
Sto6g3076 333 PRINTS Glucose/ribitol dehydrogenase family signature 163 179 IPR002347 -
Sto6g3076 333 PRINTS Glucose/ribitol dehydrogenase family signature 206 225 IPR002347 -
Sto6g3076 333 PRINTS Glucose/ribitol dehydrogenase family signature 229 246 IPR002347 -
Sto6g3076 333 Pfam short chain dehydrogenase 37 249 IPR002347 -
Sto6g3076 333 Gene3D - 23 322 - -
Sto6g3076 333 CDD retinol-DH_like_SDR_c_like 37 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3076 Sto-Chr6 37765441 37767233 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3076 31 258 Acyl Lipid Metabolism Gene Families AT1G63380 29.661 4.02e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3076 - - gmx:102670316 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3076 6 37765441 37767233 Sto6g3076 6 37765441 37767233 ECH