Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3074 ATGGTTGATGCAGCCGATAAATTGGCGTATTTTCAAGCGATCACAGGTCTAGAAGATCCGGACTTATGTACAGAGATTCTCGCAGCCCATGGGTGGGACCTCGAGCTCGCGATCTCTTCCTTCACCTCCTCTAACTCCAACCCCTCACCTTCTGATGCTTCCGCGGCCGCCGACATTGACGCTTCCGCTCGTGCCTTGCAACCATCTGAACCCTCTCCTCCCGGCTTGGCTTGGAAGCTCATTAAGTTACCGGTTTCTATTATTTCTGGTAGTTTAGGCTTGATTTCTGGCGTGATTGGGTTCGGCTTTTGGGCCGCCGGCGGTGTGCTTTCCTATTCACTCGGAATGGTGGGGTTGGGCTCCGGTCCATCTAGGAACGATCAGTCCTCGGCGCGTTTGATTCCCGTTTCGGCAGCGGCATCTGAAGCTATGGATTTTGTGGCTGCGTTTGAAAGGGAATACGGTACCAGTCGGCCTAATTTTGTAAGCGAGGGTTTTATGGATGCCCTGCAAAGGTCAAGGAACGCCTTTAAACTTCTATTTGTTTACTTGCATTCGCCGGAGCATCCGGATACGCCTTTGTTCTGTGAGAGGACTCTATGCTCTGACACTTTTGCGGCGTTTGTAAATGACAATTTCGTGTCATGGGGAGGTAGTATTCGGTCTAGTGAAGGGTTTAAGATGAGTAACAGCTTGAAGGCTTCTCGGTTTCCATTTTGTGCTGTAGTCATGGCGGCAACAAATCAAAGGATTGCACTGCTACAACAGGTTGAAGGTCCAAAATCCCCTGAGGAGATGCTTACGATACTACAGAGAGTGCTTGAAGAAAGTTCCCCAGTTCTTGTTGCAGCAAGGCTTGAAGCAGAAGAAAGACAAAACAATATGCGCTTAAGGGAGGAGCAAGATGCTGCTTACAGAGCTGCACTAGAAGCTGATCAAGCTAGGGAACGGCAGAGGAGAGAGGAACAAGAACGTCTTGAAAGGGAAGCTGCTGAAGCGGAGAGGCTGCGCAAGGAGGAAGAGGAGGCTCAAGAAAGGGCAGCAAGAGAAGCTGAAGAGAAGCAGGCTGCATTGGCTAAAATGCGCCAGGAAAAAGCTCAGTCACTTGGTGAAGAACCTGAGAAAGGACCTAATGTTACACGGgttttGGTTCGGTTTCCAAATGGTGAACGCAAGGAAAGGAGGTTCCACAACACAATGACAATCCAGACTTTATATGACTACGTGGATTCATTGGGGTGTTTAGAAGCTGAGAGTTACAGTCTGGTCTCCAATTTTCCTCGGGTTGTTTATGGACAAGAAAATCTTACGCAGTCATTGGAGGAAGCAGGATTGCATCCTCAGGCGAGTCTCTTTGTAGAGATCAATTCATGA 1374 0.4884 MVDAADKLAYFQAITGLEDPDLCTEILAAHGWDLELAISSFTSSNSNPSPSDASAAADIDASARALQPSEPSPPGLAWKLIKLPVSIISGSLGLISGVIGFGFWAAGGVLSYSLGMVGLGSGPSRNDQSSARLIPVSAAASEAMDFVAAFEREYGTSRPNFVSEGFMDALQRSRNAFKLLFVYLHSPEHPDTPLFCERTLCSDTFAAFVNDNFVSWGGSIRSSEGFKMSNSLKASRFPFCAVVMAATNQRIALLQQVEGPKSPEEMLTILQRVLEESSPVLVAARLEAEERQNNMRLREEQDAAYRAALEADQARERQRREEQERLEREAAEAERLRKEEEEAQERAAREAEEKQAALAKMRQEKAQSLGEEPEKGPNVTRVLVRFPNGERKERRFHNTMTIQTLYDYVDSLGCLEAESYSLVSNFPRVVYGQENLTQSLEEAGLHPQASLFVEINS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3074 457 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 10-LIKE 1 457 - -
Sto6g3074 457 Pfam UBA-like domain 6 46 - -
Sto6g3074 457 CDD UBX 381 454 - -
Sto6g3074 457 MobiDBLite consensus disorder prediction 44 72 - -
Sto6g3074 457 PANTHER FAS-ASSOCIATED PROTEIN 1 457 - -
Sto6g3074 457 Coils Coil 283 303 - -
Sto6g3074 457 SMART 45neu3 145 271 IPR006577 -
Sto6g3074 457 SUPERFAMILY Thioredoxin-like 140 285 IPR036249 -
Sto6g3074 457 CDD UAS 161 276 - -
Sto6g3074 457 ProSiteProfiles UBX domain profile. 375 453 IPR001012 GO:0005515
Sto6g3074 457 CDD UBA_FAF 11 42 - -
Sto6g3074 457 Pfam UBX domain 375 454 IPR001012 GO:0005515
Sto6g3074 457 MobiDBLite consensus disorder prediction 311 371 - -
Sto6g3074 457 Coils Coil 306 371 - -
Sto6g3074 457 Gene3D - 2 53 - -
Sto6g3074 457 SMART ubx_3 373 455 IPR001012 GO:0005515
Sto6g3074 457 MobiDBLite consensus disorder prediction 311 378 - -
Sto6g3074 457 SUPERFAMILY Ubiquitin-like 338 454 IPR029071 -
Sto6g3074 457 Gene3D Glutaredoxin 134 294 - -
Sto6g3074 457 Gene3D - 378 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3074 Sto-Chr6 37745104 37749336 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3074 K18726 - qsu:111992347 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3074 6 37745104 37749336 Sto6g3074 6 37745104 37749336 ECH