Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3072 ATGGCTGAGTTGATTGGATTTGGACCCAGGTTATACAGTTGCTGTAATTGTCGAAACCATGTTGCTCTTCATGATGATGCTATTTCTAAAGCATTTCAGGGGAAAAATGGACGAGCCTTTTTGTTCTCACATGCAATGAACGTTATGGAAGGGCCAAAAGAAGATAGGCACCTCATGACAGATCTCCACACAGTTGCAGATGTATACTGTGGTGACTGCCGTGAAGTGCTTGGTTGGAAGTATGAATATGCATATGAGGAAATCCAGAAGTATAAGGAAGGCAAGTACATACTTGAGAAATCTAAAATAGTGAGGGATGActggtaa 327 0.4037 MAELIGFGPRLYSCCNCRNHVALHDDAISKAFQGKNGRAFLFSHAMNVMEGPKEDRHLMTDLHTVADVYCGDCREVLGWKYEYAYEEIQKYKEGKYILEKSKIVRDDW 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3072 108 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 12 103 IPR004910 -
Sto6g3072 108 ProSiteProfiles Yippee domain profile. 10 107 IPR034751 -
Sto6g3072 108 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 2 108 IPR039058 -
Sto6g3072 108 PANTHER PROTEIN YIPPEE-LIKE 2 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3072 Sto-Chr6 37738441 37739046 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3072 - - zju:107430059 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3072 6 37738441 37739046 Sto6g3072 6 37738441 37739046 ECH
Sto6g3072 6 37738441 37739046 Sto9g2722 9 29110835 29112161 ECH
Sto6g3072 6 37738441 37739046 Sto5g1310 5 8947263 8948941 ECH