Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3055 ATGAAAGGGCGCTCGCACCGACTTCAGAGTTCAGACCCTCCCGATGACTGGATTGATGGGTCTTGGACTGTGGATTGCATATGTGGTGTGAATTTTGACGATGGGGAGGAGATGGTCAATTGTGACGAGTGCGGTGTGTGGGTGCACACCCGTTGCTCTCGATATGTCAAAGGAGATGATAGGTTTGCATGCGATAAATGCAAGAGCAAGATTAATCGGTCTGATATCGAGGAAACAGAGGTCGCCCAATTGTTAGCTGAACTCCCTACGAAGCCCATCAGAATGGAGAATTCATTTGTACCCAACGTAACTCCTCGGCGTCCTTTCAAGCTTTGGACTGACATACCTATGGAGGAGAGAGTACATATTCAAGGAATTCCTGGTGGTGATCCTTCCCTGTTTGGAGGACTGTCTATTTATAAAGGGGAGGTATGGAAATGCAGAGGGTATGTTCCCAAAAAGTTTAATTTTCAGTATAGAGAATTCCCCTGCTGGGATGAGGGTTCCAAAAATGAGGAAGAGAACGAGAATCCTGTTGATAGAGGGGCGGGGGTTCTCTGTTCCTTATCTAAAGAGAGTATCTTGGCCAGCCCTATTGCAGCTTTAGTTGATATGAGAGCCAGGGAGAGGGAAAATGGTTTTGATCTGAAGAAATCTTTCAAAGAGATGAAGAAGTGTGATGCTAAAGATACAGAAGCTGTTAGGCATGTCcagaatggcatgaagaaggagaGAAGCTTACTTCGGTCTGTTGTGCATTCGGGCAAGCAGAAAAAAGAAGAGTCTGGAACGTCGTCCAAAGAGCGTAGTGGGAAGAAGAGGGTAAAAACTTCAGAGAAAGAGGCAGATCCCAAGAGGAGAAGTTCGCATTCATCTAAAACAGCATTTACACCCACCAGTGATGCAAAACAATTGGAATTTTATGAAGACAGAGGTCCGAAGATTTTCAAGACTGACACTTGGagtataaagaataaaaatttgaaagacGTTGTGGTTCAGGATCACATTTCAAATGATCACTTTGCTGTGGATACCATTATGGAGGAGCCAAATATCAACTTGGCAACTACTGAGGACTCTTCAGAAGCCTTATATCCTGACACGACGAGGCATAGTTTTTCTGCTGGACAAGAAATAGCAGAAGAAAAAACTGAACATAGAACTCCTGTGGTTGAAATTTCTTCCAGGACTGGTGATACTGTTTCACCATTATTAAAGCATAATTTTGTTGGAAATGCTCCAATTGAAGAACAGGAGGGAGATGGCCTGGCGGTTGATAATGCAGATGATAGTATAGTAGTCAGAAGCACAATGAGTCCTCCTGTAGAAGATCTTTGTGGTCCTGCCCCTGAACATAAGGATAACATGGATTTCCAAGATTTTAACCTTGAAATGTGTCCAAGCTCACAAAGCAAATCTAAGGTGAAGAGAGCAGGGGATGATGATAATTCTAGGAAGCATTTAATATCTCATTCTTCTACTAGTGATCTTAAATATGATGAGAAACTGCCTAATCACATCTCTGATCATGTTAATGATACTGCGGCTACCAATTCACCATCCTGCGAAAATAAGTTGGAAGATATTGATAGAAAATTAGAAGTACTCGTTGATTGTCATACCAATAATTCTGAGGAATTATCAGGTGATTTTTGTCATGGAAAACAAGAACTAGAGGAGTCTGAAGGTACCATGGAAACACAGAAGGGTTTTCCAGAGATAAAAGATGGTTCAAGCTATGCTGAACAGCCATCAAAATCGGAAACAGTATGTACTCATAAAATGTTATCATGTCTTGGAAAGACATCATTAAGTTCCTCAACCATGAATACCAAAATACCAGCTAATGACCAAAAATCTGAAGAGACTGAAATTCCAAATCCTCCTACAAAGCATGGAGTGATGGTTGATTGCAACATGCACAATAAGAAAGAAAGTAATCAGAATGATGTGCGGGATGAAGTTCCAAGGAAGTTTGTAAGAGAACGTCCAAAATCATCTTTGAATGGTAATTCCAAAGTAATGCATTCGAGCAAAAGTACACAAAATTCTGTTTCAAAGCAAGTAAGTTCAGATGCAAGAGATTCTGTTAATTGTTCTTCTAAAGCATCTTTGGCACATCAGACTGCAACTAATTTAGGCTTGAGTGAGTCTAATGCATCGTCGGTCCATCAAAAGGCTTTACAAGCGCCAAATAAGGTTTCATCTTCAGTACCACCTAGAGGTGAAAAGCTTAACCAGACAAACTTCCAACCTTCCTCTAAGGTGAACCAGAATCATGTGCCATCACCTTCTCCGACATCTAATTCCTCTGCAATGCTAAGTGATGAGGAGCTTGCATTACTATTGCaccaagaactaaatagttctCCCCGAGTACCTCGTGTACCCCGAGCACGCCATGGGCCCCAGCTGACTTCTCCTAGTGCTGCAAGCATGCTAATGAAGCGAACATCTTCTGCTGGAGGAAAGGATCATTGTTCGTTTTCTAGGAGAAAATACAAGGATGCATCCAGAGATGGTCCTTGTAGTTCTCGGGAACTTGAAGATGAAGCTAAAAGGATAGAGAATGTATCATCCTCCTTTGAACAGAAGAAACAAGATATGGAATATGGGGAAGATGCTCCTGTAAAGGAAGAAGGCCATGTATCTATGACAACCATAAAGAATGTTGCTCCTGCCTCCTCTGCAACTGCAAATAGTAGTCCATCCTCCCCAACTGAGGATCGAATTTTGTCATTTGTACGCAACTCACCAAGAAACATATCTGATGATGATACAGGAGCTGCTGGAAGGCCAGTCCATCGCACTTTACCTGGGTTGATCAATGAGATTATGAGCAAGGGCCGTCGAATTACGTATGAGGAACTATGTAATGCTGTGCTGCCGCACTGGCATAACTTGAGGAAGCATAATGGAGAGCGCTATGCTTACTCAAGTCACTCGCAGGCTGTTCTTGATTGTCTGAGGAACCGGCATGAATGGGCAAGGTTGGTTGATCGTGGCCCAAAGACAAACTCTACCAGGAAAAGGCGAAAGCTTGAAGTTGAAGAATCTGATGACAACGGAAACAGCAAGGGCAGAAGTTCAAAAGGGGCGGAAGGGAAGAACATTGAGCTGCAGAAAGAAGAGTTCCCAAAAGGCAAGCGTAAAGCACGGAAGCGCAGGCGCCTTGTTCTCCAAGGAATAGCAGTGAAAGATGTCAGGAAAAAGAAGGCTGACTCACTGACTGATGAGGATGTAGGTCCATTCTCCAATTCTAGTGAAGAGGAAAGCATGTTTAGTGAGGATGAAATTCAGGGTGACAGAACATGTCCAATAGGAGGAAGCGAGCCTTCTGCTAGTTCAGATGAGGCAGAAAGTGCCTAA 3372 0.4223 MKGRSHRLQSSDPPDDWIDGSWTVDCICGVNFDDGEEMVNCDECGVWVHTRCSRYVKGDDRFACDKCKSKINRSDIEETEVAQLLAELPTKPIRMENSFVPNVTPRRPFKLWTDIPMEERVHIQGIPGGDPSLFGGLSIYKGEVWKCRGYVPKKFNFQYREFPCWDEGSKNEEENENPVDRGAGVLCSLSKESILASPIAALVDMRARERENGFDLKKSFKEMKKCDAKDTEAVRHVQNGMKKERSLLRSVVHSGKQKKEESGTSSKERSGKKRVKTSEKEADPKRRSSHSSKTAFTPTSDAKQLEFYEDRGPKIFKTDTWSIKNKNLKDVVVQDHISNDHFAVDTIMEEPNINLATTEDSSEALYPDTTRHSFSAGQEIAEEKTEHRTPVVEISSRTGDTVSPLLKHNFVGNAPIEEQEGDGLAVDNADDSIVVRSTMSPPVEDLCGPAPEHKDNMDFQDFNLEMCPSSQSKSKVKRAGDDDNSRKHLISHSSTSDLKYDEKLPNHISDHVNDTAATNSPSCENKLEDIDRKLEVLVDCHTNNSEELSGDFCHGKQELEESEGTMETQKGFPEIKDGSSYAEQPSKSETVCTHKMLSCLGKTSLSSSTMNTKIPANDQKSEETEIPNPPTKHGVMVDCNMHNKKESNQNDVRDEVPRKFVRERPKSSLNGNSKVMHSSKSTQNSVSKQVSSDARDSVNCSSKASLAHQTATNLGLSESNASSVHQKALQAPNKVSSSVPPRGEKLNQTNFQPSSKVNQNHVPSPSPTSNSSAMLSDEELALLLHQELNSSPRVPRVPRARHGPQLTSPSAASMLMKRTSSAGGKDHCSFSRRKYKDASRDGPCSSRELEDEAKRIENVSSSFEQKKQDMEYGEDAPVKEEGHVSMTTIKNVAPASSATANSSPSSPTEDRILSFVRNSPRNISDDDTGAAGRPVHRTLPGLINEIMSKGRRITYEELCNAVLPHWHNLRKHNGERYAYSSHSQAVLDCLRNRHEWARLVDRGPKTNSTRKRRKLEVEESDDNGNSKGRSSKGAEGKNIELQKEEFPKGKRKARKRRRLVLQGIAVKDVRKKKADSLTDEDVGPFSNSSEEESMFSEDEIQGDRTCPIGGSEPSASSDEAESA 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3055 1123 PANTHER UNCHARACTERIZED 1 1120 - -
Sto6g3055 1123 MobiDBLite consensus disorder prediction 228 300 - -
Sto6g3055 1123 MobiDBLite consensus disorder prediction 1001 1123 - -
Sto6g3055 1123 SUPERFAMILY FYVE/PHD zinc finger 14 71 IPR011011 -
Sto6g3055 1123 Coils Coil 846 866 - -
Sto6g3055 1123 MobiDBLite consensus disorder prediction 562 587 - -
Sto6g3055 1123 MobiDBLite consensus disorder prediction 228 290 - -
Sto6g3055 1123 MobiDBLite consensus disorder prediction 468 500 - -
Sto6g3055 1123 MobiDBLite consensus disorder prediction 718 773 - -
Sto6g3055 1123 MobiDBLite consensus disorder prediction 827 880 - -
Sto6g3055 1123 MobiDBLite consensus disorder prediction 605 624 - -
Sto6g3055 1123 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 75 IPR013083 -
Sto6g3055 1123 MobiDBLite consensus disorder prediction 638 665 - -
Sto6g3055 1123 MobiDBLite consensus disorder prediction 1061 1079 - -
Sto6g3055 1123 ProSitePatterns Zinc finger PHD-type signature. 26 67 IPR019786 -
Sto6g3055 1123 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SET-26-RELATED 1 1120 - -
Sto6g3055 1123 MobiDBLite consensus disorder prediction 475 500 - -
Sto6g3055 1123 MobiDBLite consensus disorder prediction 790 880 - -
Sto6g3055 1123 MobiDBLite consensus disorder prediction 1001 1048 - -
Sto6g3055 1123 MobiDBLite consensus disorder prediction 605 697 - -
Sto6g3055 1123 SMART PHD_3 25 68 IPR001965 -
Sto6g3055 1123 MobiDBLite consensus disorder prediction 666 697 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3055 - - gmx:100810855 1270.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3055 6 37618108 37625033 Sto6g3055 6 37618108 37625033 ECH