Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3045 ATGAACCAAACCAAGCACAACTCGAAACGCCAATCCCGCCACCGCGGCGAACTTCGCCGTCCATCCAATACCGGTCGTCGCAGAGTTACTGGTTTATCATCAAAGACCTTAGAGAGAGATATCTACGATTTTTTTGCTTTCTCTGGTGCAATTGAGAATGTTGTAATTTTCAGGCCTAATGTCTATCATACCTCCACTGCTTATGTGACATTCAAAGATGCAGACGCTCAAGAAACTGCTTGCTTGCTTAGTGGTGAAACTATTTTGGATCAATCCGTATGCATAACACGCTGGGGGCATTACCAAGACGAATTTGATTCTTGGGACGGAGATCTGGATGAAACTGCTCCATCTCAACCACAAAGCAGTCAATTTGCTACATCTGCTGGAGAAGTTGTCAAGACTATGCTAACAAGGGGATGTGTTCTCAGTAAAGACGCATTAGCTAAGGCTAAAAATTTCGATGCTACTATGACAGGGAAGGTTGCTAATCTGAGCCATAGGATTGGCCTTACTGATAAGATATCTTCAGGTGTTAAAGCTGTTAAATCTGTGGATCAGAAGTACTATGTCTCGGAATCGGCCAAGTCAGCTGCAGCAGCAACAGGAAGATCAGTTGCAGCAGCTGCAGCAGTAACAGGAAGGTCAGTTGCTGCAGCTGCAAACACTGTTGTAAACAGTGGCTGTTTTTCCAATGGAGCCTTGTGGTTATCAGGTGCTTTAACTCGGGCATCACAGGTTGCAGGTGGTTTAGGTAGCCGTACTGTTAAGAAGTGA 777 0.4505 MNQTKHNSKRQSRHRGELRRPSNTGRRRVTGLSSKTLERDIYDFFAFSGAIENVVIFRPNVYHTSTAYVTFKDADAQETACLLSGETILDQSVCITRWGHYQDEFDSWDGDLDETAPSQPQSSQFATSAGEVVKTMLTRGCVLSKDALAKAKNFDATMTGKVANLSHRIGLTDKISSGVKAVKSVDQKYYVSESAKSAAAATGRSVAAAAAVTGRSVAAAANTVVNSGCFSNGALWLSGALTRASQVAGGLGSRTVKK 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3045 258 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 28 210 - -
Sto6g3045 258 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 209 257 - -
Sto6g3045 258 SUPERFAMILY RNA-binding domain, RBD 29 98 IPR035979 GO:0003676
Sto6g3045 258 Gene3D - 2 105 IPR012677 -
Sto6g3045 258 MobiDBLite consensus disorder prediction 1 31 - -
Sto6g3045 258 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 29 89 IPR000504 GO:0003723
Sto6g3045 258 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 209 257 - -
Sto6g3045 258 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 28 210 - -
Sto6g3045 258 SMART rrm1_1 26 97 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3045 Sto-Chr6 37531182 37533154 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3045 - - gmx:100805907 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3045 6 37531182 37533154 Sto6g3045 6 37531182 37533154 ECH