Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3037 ATGAGTAACCAGAAGAAGAGAAATTTCCAGATAGAAGCGTTTAAGCACAGGGTTGTGATGGATCCGAAATATGCTGATAAGACCTGGAAGATTCTGGAGCATGCAATTCATGAGATTTACAATCACAACGCTAGTGGTCTCAGTTTCGAAGAGCTTTACAGAAATGCATACAATATGGTGCTTCACAAATTTGGTGAGAAGCTGTACACAGGATTGGTTACAACTATGACTGGTCATCTCAAAGATATAGCTAAATCTATTGAAGCATCTCAAGGTGGTTCCTTTCTGGAAGAACTGAATAGGAAATGGAATGATCATAATAAGGCTCTACAAATGATTAGAGACATACTGATGTACATGGATAGGACTTACATTCCAAGCTCTCAGAAGACACCTGTACATGAGCTCGGGTTGAACCTCTGGAGAGAAAATGTCATTTACTCCACTCAGATCAGAACTAGGCTGTTGAATACACTTTTGGAGTTGGTACATAAAGAACGCACCGGGGAAGTTATTGATAGAGGGATAATGAGGAATATAACAAAGATGCTAATGGATTTAGGTCCTTCTGTTTATGGGCAAGAATTTGAGGTTCATTTCCTTCAAGTTTCAGCTGAGTTCTACAGGGTAGAATCTCAGAGATTCATTGAATGCTGTGATTGTGGGGATTAtctcaagaaagctgagagacGTCTGAATGAGGAAATCGATAGAGTGGGCCATTACTTGGATTCGAGgagtgaaaagaaaattaccaATGTGATGGAGAAGGAGATGATTGAAAATCACATGCTTAGATTAATCCATATGGAGAATTCTGGGTTAATAAACATGCTTTGTGATGATAAATACGATGATCTGGGTAGAATGTATAATTTGTTCCGTCGTGTTCCAGATGGTCTTCTGAAAATACGAGAAGTGATGACTTCCCATGATCCAGAAAGGTTGAAGGACCCGGTGGAATTTGTTCAAAGGCTTTTAGACGAGAAAGATAAATACGACAAGATTATAAACTTGGCATTTAACAATGACAAGTCCTTCCAGAATGccttaaattcctcatttgaaTACTTCATCAACTTGAATCCTCAATCACCAGAGTTCATTTCACTATTTGTGGATGATAAACTCCGAAAAGGTCTTAAGGGGGTCAGTGAGGATGATGTCGAGATTACTTTCGACAAGGTGATGATGCTTTTCCGGTTCTTGCAGGAAAAAGATGTATTCGAGAAATATTATAAACAGCACCTGGCAAAGCGGCTTTTGTCCGGGAAAACAGTTTCCGACGATGCAGAGAGAAGTCTTATAGTTAAGCTCAAGACAGAATGCGGTTACCAATTTACTTCCAAATTAGAGGGCATGTTTACAGACATGAAAACCTCTCAGGACACAATGCAAGGTTTTTACTCGAGCCACCCGGAACTAGTCGATGGCCCTACACTAACAGTTCAAGTTCTTACAACCGGGTCTTGGCCAACTCAGGCTACTGTTACATGCAACCTGCCCGCTGAAATGTCTGCACTCTGTGAGAAGTTTCGGTCATATTACCTCGGCACCCATACTGGCCGGAGATTGTCCTGGCAAACTAATATGGGCACGGCAGACTTAAAAGCGACATTCGGGAAGGGCCAGAAGCACGAGTTAAATGTCTCTACTTACCAAATGTGTGTCCTCATGCTGTTCAACAATGCTGATAGACTTAGCTACAAGGAGATCGAGCAAGCAACCGAGATTCCAGCTTCGGACCTGAAGAGATGCCTGCAATCCCTGGCTTTAGTGAAGGGAAGAAATGTTCTGAAGAAGGAGCCTATGAGTAAAGACGTTGGAGAGAACGACGCGTTCTTTGTTAACGACAAGTTCAGCAGTAAATTATACAAGGTAAAAATCGGAACTGTAGCTGCGCAGAAGGAATCGGAACCAGAGAAACAGGAAACCCGACAGAGAGTAGAAGAAGACAGGAAGCCCCAGATTGAAGCAGCAATTGTGAGGATCATGAAGTCAAGGAAACAACTGGATCATAACAATCTTATAGCTGAAGTCACAAAGCAGTTACAATCGCGATTCCTGGCGAATCCGACGGAGGTAAAGAAACGGATTGAGTCTCTCATCGAGAGGGAGTTTTTGGAGAGAGATGATAATGACAGAAAATTGTACCGATATCTTGCCTAG 2169 0.4089 MSNQKKRNFQIEAFKHRVVMDPKYADKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYTGLVTTMTGHLKDIAKSIEASQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSSQKTPVHELGLNLWRENVIYSTQIRTRLLNTLLELVHKERTGEVIDRGIMRNITKMLMDLGPSVYGQEFEVHFLQVSAEFYRVESQRFIECCDCGDYLKKAERRLNEEIDRVGHYLDSRSEKKITNVMEKEMIENHMLRLIHMENSGLINMLCDDKYDDLGRMYNLFRRVPDGLLKIREVMTSHDPERLKDPVEFVQRLLDEKDKYDKIINLAFNNDKSFQNALNSSFEYFINLNPQSPEFISLFVDDKLRKGLKGVSEDDVEITFDKVMMLFRFLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFYSSHPELVDGPTLTVQVLTTGSWPTQATVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGTADLKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYKEIEQATEIPASDLKRCLQSLALVKGRNVLKKEPMSKDVGENDAFFVNDKFSSKLYKVKIGTVAAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRKQLDHNNLIAEVTKQLQSRFLANPTEVKKRIESLIEREFLERDDNDRKLYRYLA 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3037 722 Gene3D Cullin Repeats 14 143 - -
Sto6g3037 722 SMART cul_2 394 540 IPR016158 -
Sto6g3037 722 PANTHER CULLIN-3A-RELATED 3 722 - -
Sto6g3037 722 Gene3D - 634 722 IPR036388 -
Sto6g3037 722 SUPERFAMILY Cullin repeat-like 22 362 IPR016159 -
Sto6g3037 722 Gene3D Cullin Repeats 265 362 - -
Sto6g3037 722 Gene3D Cullin; Chain C, Domain 2 478 633 - -
Sto6g3037 722 SUPERFAMILY "Winged helix" DNA-binding domain 633 722 IPR036390 -
Sto6g3037 722 SUPERFAMILY Cullin homology domain 358 630 IPR036317 -
Sto6g3037 722 SMART Cullin_Nedd8_2 649 716 IPR019559 -
Sto6g3037 722 Pfam Cullin protein neddylation domain 652 714 IPR019559 -
Sto6g3037 722 Pfam Cullin family 29 620 IPR001373 GO:0006511|GO:0031625
Sto6g3037 722 Gene3D Cullin Repeats 363 473 - -
Sto6g3037 722 ProSiteProfiles Cullin family profile. 364 591 IPR016158 -
Sto6g3037 722 Gene3D Cullin Repeats 145 264 - -
Sto6g3037 722 PANTHER CULLIN 3 722 IPR045093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3037 Sto-Chr6 37394511 37398155 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3037 K03869 - gmx:100795098 1363.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3037 6 37394511 37398155 Sto6g3037 6 37394511 37398155 ECH