Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3019 CTGCTACATCTACAGTATCTCTCAGTTTCCTGTGTTGCCCAGAACTTTGATTTCTTCTACTTTGTCCAGCagTGGCCAGGGTCATACTGTGACACTCAGAAGAGTTGCTGCTACCCCACAACTGGAAAGCCCAAAGCAGATTTTGGCATCCATGGGCTTTGGCCTAACTACAATGATGGCACCTACCCTTCTAATTGTGATCCTAGTAACCCTTTTAAACAAACTCAGATATCAGATCTGACCAGCAATTTACAGAGGAATTGGCCCACATTAGCGTGCCCACGTGGGGATGGGACACAATTTTGGAGTCATGAATGGGAGAAACATGGCACTTGCTCAGAGTCAATCCTTCAGCAACATGACTACTTCGAAGCAGCTCTAAGCCTCAAACAGAGATCCAATCTCCTTCAAGCTCTCACAAGTGCAGGAATAGAAGCAGATGGAGGATCCTATAGCTTGAGCAGCATAAAAGGGGCTATAAAGGAAGCAATTGGGCACAGTCCATTCATTGAATGCAATGTGGATTCTTCAAGAAACACTCAGCTTTATCAAGTTTACTTGTGTGTTGACACTTCTGCTTCCAACTTCATTGAGTGCCCTGTCTTCCCTAAGAACAACAAGTGTGCCTCTCAGATTGAATACCTGTCAATTGTGTGTGTCTCACAATCACAGTCACAGGATAGTTTTGATTTCTTCTACTTTGTTCTCCAGtggcCAGGAGCATATTGTGACACAAAGCAAAGTTGCTGCTATCCAAAGACAGGAAAACCAGCTTCTGATTTTGGGATTCATGGCTTATGGCCTAACTACAAAGATGGCTCTTGGCCCTCTAACTGTGATCCAGATAGCGTCTTTGATAAATCTCAgATATCGGATCTGATAAGCAGCATGGAGAAGGAATGGCCATCACTGAGCTGCCCAAGCAGCAATGGGATGAGATTTTGGTCTCATGAGTGGGAAAAGCATGGAACCTGTGCTGAGTCTGAGCTTGATATTCGTGATTACTTTGGGAAAGCCCTCCAACTCAAACACAAACTCAATCTCCTCAACATTCTTAAGAATGCAGGGATTGAAGCAGACGATGGATTCTACAGCTTGGAGAGCATTTCAGAGGCAGTAAaagagggattagggtttacaccTGGGATTGAATGCAATAGAGATTCTGCACATAATACTCAGCTTTACCAAGTTTACTTCTGCGTTGATACTACTGCCTCTGACTTCATTGAGTGCCCAATTCTTCCAACAACCAAATGTGGTTCACAAATTCAATTTCCCAAGTTTTAA 1290 0.4264 LLHLQYLSVSCVAQNFDFFYFVQQWPGSYCDTQKSCCYPTTGKPKADFGIHGLWPNYNDGTYPSNCDPSNPFKQTQISDLTSNLQRNWPTLACPRGDGTQFWSHEWEKHGTCSESILQQHDYFEAALSLKQRSNLLQALTSAGIEADGGSYSLSSIKGAIKEAIGHSPFIECNVDSSRNTQLYQVYLCVDTSASNFIECPVFPKNNKCASQIEYLSIVCVSQSQSQDSFDFFYFVLQWPGAYCDTKQSCCYPKTGKPASDFGIHGLWPNYKDGSWPSNCDPDSVFDKSQISDLISSMEKEWPSLSCPSSNGMRFWSHEWEKHGTCAESELDIRDYFGKALQLKHKLNLLNILKNAGIEADDGFYSLESISEAVKEGLGFTPGIECNRDSAHNTQLYQVYFCVDTTASDFIECPILPTTKCGSQIQFPKF 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3019 429 PANTHER F7A19.32 PROTEIN 1 214 - -
Sto6g3019 429 ProSitePatterns Ribonuclease T2 family histidine active site 1. 48 55 IPR018188 GO:0003723|GO:0033897
Sto6g3019 429 ProSitePatterns Ribonuclease T2 family histidine active site 2. 314 325 IPR033130 -
Sto6g3019 429 SUPERFAMILY Ribonuclease Rh-like 226 428 IPR036430 GO:0003723|GO:0033897
Sto6g3019 429 PANTHER RIBONUCLEASE T2 220 429 IPR001568 GO:0003723|GO:0033897
Sto6g3019 429 CDD RNase_T2_euk 229 420 IPR033697 -
Sto6g3019 429 ProSitePatterns Ribonuclease T2 family histidine active site 2. 101 112 IPR033130 -
Sto6g3019 429 ProSitePatterns Ribonuclease T2 family histidine active site 1. 261 268 IPR018188 GO:0003723|GO:0033897
Sto6g3019 429 SUPERFAMILY Ribonuclease Rh-like 10 215 IPR036430 GO:0003723|GO:0033897
Sto6g3019 429 CDD RNase_T2_euk 16 214 IPR033697 -
Sto6g3019 429 Gene3D - 10 223 IPR036430 GO:0003723|GO:0033897
Sto6g3019 429 Gene3D - 224 429 IPR036430 GO:0003723|GO:0033897
Sto6g3019 429 PANTHER F7A19.32 PROTEIN 220 429 - -
Sto6g3019 429 Pfam Ribonuclease T2 family 16 199 IPR001568 GO:0003723|GO:0033897
Sto6g3019 429 Pfam Ribonuclease T2 family 229 412 IPR001568 GO:0003723|GO:0033897
Sto6g3019 429 PANTHER RIBONUCLEASE T2 1 214 IPR001568 GO:0003723|GO:0033897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3019 Sto-Chr6 37265333 37274264 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3019 K01166 - gmx:100778239 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3019 6 37265333 37274264 Sto6g3019 6 37265333 37274264 ECH