Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3008 ATGTCTGACAATAACGTTGAGGATGCAAAGAAACAGGAGCGTGTTGATGAGACTCCCTTAAATCCAGTTGATTGTGAAAATCCTGTAGATGATAAGGATGATTCAGataaaaatgacaaaagtaCCATGCCCACACACCAGCAGGAGGAAGAAGCTATCAAGAAAAAGTATGGAGGCATGTTACCAAAGAAGGCACCTCTAATATCCAAGGACCACGAACGTGCTTATTTTGACTCTGCTGATTGGGCTTTAGGGAAGCAAGGAGCACAAAAGCCTAAAGGACCACTTGAAGCACTCCGCCCAAAGTTGCagCCCACACCACACCATCAAGTCCGGTCAAGGCACTTCGCTTCTGCTTCGGTAGATGATGAAGTTTATGGTGGTGATAATGCTAATGATGCTTCTCCGGAGGATCGGAGTACCATTGAAGATGCCGGCCATGGTACCAACAATCCATCTCAGGATCCGAGCTGCCATCAGGATTTTCCTGTAATGTGCTTTTCAAGGTTTGATGGAACAGTGATGTTCCCTTCAGTTTGTATTATGCGTTATATGGCATTTACTTTTCTTCCTCCAACTGTAGGATTTTTATTACTGAGCTTTTGGTTTGCAAGTGGAAATTATTCACCTCAAGACATGTGGGCTGAAGCTAAAACGGGGTCGCTTTGTTGTGTGGCTTCAAGGCCACATGGATCAAATGCTGCCAGTGGGGAGTGGTCCGTGGGTCCACATGAGCCCTACTGGCGAACCAATACAAGCTTTTCACCACCTCCATCAAGATGGGATTTCAGATTCCAATCTGAAGGTCTGCCTTATAGTTTGCATGATGGTATTCAATTCTATGGGTCTTCTACATCATCAAATGCGAAAGATAGTAGGGGATGGGTGAGAGGTAACCGCTTGTATGATCTCCACTATTCTGCTTCAGATGGTAACGGACTTTTTCTTAGTAGTCCATCTGACCTCTCCCATGGTCCACAATGGACACCTCCAGCAGTACAGGAAATAACTATTGATGATTATGAAGCTGCAACCAGGAAAGATCCTTCTGtgggccggatatcctttatgCCAACCAAGGAGGGAACTTCAGAAAATCCAGATAGTGGAGGCTCCATTTCATCCCGGTCAGAGAGTAGTGAGTCTGAGTCCACTGCAAAATCACGCTCCTCCCAACGGAGTTTCTCTAATCGCCGTTCTTTCATCTCCAAACCTGTTCATCCTTTGTCCTTTCCTGACTTTGCTCCTGCTAGGGAAGCCTTTGAACCTGCAGTTGCAGGATTTTCAGAGTTTGATGCTTCCACTCCGCTCAGAGATGCCCAGCGTTGTAGTAGTGCAAGCAGCAGCCTTGATTTTGTAGATGTGCCTGAGTCATTTGAATCCGAAACATCTAGTCGCCCACATATTCCTTCAGATGGATTCAGATGTAGCCTGTGTGAAAGATTTCTATCACAGAGATCACCTTGGAGTTCCCGTCGAATTGTGAGAAGTGGAGATATGCCTACCGCTGGGGTCCTTCCTTGTTGTCATGTTTTTCATGCTGAATGCTTGGACCAAACAATACCAAAGACTCGGAAAAATGATCCTCCTTGCCCTATCTGTGCCAGATTGGAGGAGGAAAATTCCCTTGATCAAAGGGGTATTTTGAGACTGAAGAATAATATTCCTAGAGTTAGCTCGTTTCGTGAGGATGGGCCGTCAAGACATTGGGGCTGTGCGCAGGTGGGTGATTGCGTTGACGGGGCCCTGCATGCACCGCCACGCAACGCTATGCTATTACTCAACAGGAATCGCATTAAAAAGAATCTTTCTTCAAAGGGTACTGTAAGCAAGGAATTTCCGGGAAAGTTGACAAAAAGTGGAGCATATTCTTCACAACTGTTTAGTGGAATTTCAGCTGATCCGGAAACAGTTGGTTGTTCGAAGGCAATAGCAGGCCCAAGCATGAAGAAGTGA 1956 0.4504 MSDNNVEDAKKQERVDETPLNPVDCENPVDDKDDSDKNDKSTMPTHQQEEEAIKKKYGGMLPKKAPLISKDHERAYFDSADWALGKQGAQKPKGPLEALRPKLQPTPHHQVRSRHFASASVDDEVYGGDNANDASPEDRSTIEDAGHGTNNPSQDPSCHQDFPVMCFSRFDGTVMFPSVCIMRYMAFTFLPPTVGFLLLSFWFASGNYSPQDMWAEAKTGSLCCVASRPHGSNAASGEWSVGPHEPYWRTNTSFSPPPSRWDFRFQSEGLPYSLHDGIQFYGSSTSSNAKDSRGWVRGNRLYDLHYSASDGNGLFLSSPSDLSHGPQWTPPAVQEITIDDYEAATRKDPSVGRISFMPTKEGTSENPDSGGSISSRSESSESESTAKSRSSQRSFSNRRSFISKPVHPLSFPDFAPAREAFEPAVAGFSEFDASTPLRDAQRCSSASSSLDFVDVPESFESETSSRPHIPSDGFRCSLCERFLSQRSPWSSRRIVRSGDMPTAGVLPCCHVFHAECLDQTIPKTRKNDPPCPICARLEEENSLDQRGILRLKNNIPRVSSFREDGPSRHWGCAQVGDCVDGALHAPPRNAMLLLNRNRIKKNLSSKGTVSKEFPGKLTKSGAYSSQLFSGISADPETVGCSKAIAGPSMKK 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3008 651 Pfam cAMP-regulated phosphoprotein/endosulfine conserved region 45 115 IPR006760 -
Sto6g3008 651 MobiDBLite consensus disorder prediction 343 397 - -
Sto6g3008 651 PANTHER MANDELONITRILE LYASE-RELATED 219 613 - -
Sto6g3008 651 MobiDBLite consensus disorder prediction 1 58 - -
Sto6g3008 651 MobiDBLite consensus disorder prediction 86 156 - -
Sto6g3008 651 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 459 537 IPR013083 -
Sto6g3008 651 PANTHER EXPRESSED PROTEIN 219 613 - -
Sto6g3008 651 SUPERFAMILY RING/U-box 472 536 - -
Sto6g3008 651 MobiDBLite consensus disorder prediction 357 397 - -
Sto6g3008 651 SMART ring_2 476 534 IPR001841 -
Sto6g3008 651 MobiDBLite consensus disorder prediction 1 66 - -
Sto6g3008 651 ProSiteProfiles Zinc finger RING-type profile. 476 534 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3008 Sto-Chr6 37175320 37184519 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3008 - - gmx:100789831 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3008 6 37175320 37184519 Sto6g3008 6 37175320 37184519 ECH