Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3006 ATGTCTAGCTTCACTCACACCACCACACTCCTCCATGCCCATCTCAAAACCAAGCACCACCACACCAACCCTcctcctccttcctcttcctcttcttcttcaaagcCCAATAGGAGGAAGTTGGTATCAAGCTTGCTGGGCAGTTCAATTGCGGCGCTGGCAGTAGGCGCGGCAGCCCACGGGCCCCCGGCGGCCCAGGCCCAGAGCTGGGGGACGCGGTCGTTCCTGCGGGAGCACTTCTTCGAGGCGGGGCTGTCGCCGGAGGAGTCGGCGGAGAGGATAAAGCAGACGGCGGAGGGGCTGCATAGCATGAGGGAAATGCTGGAGAACATGTCGTGGAGATACGTGATATTCTACATAAGACTGAAGCAGGCTTATCTTGATAGGGATTTGAAAACTGCCATGGCCACCTTGCCTGATTACATGCGCAAGGACTACGTTAAGGTTGCTAATGAGTTGGTGGATAACATGGCTGAGCTTGATCGGTATGTTCGGTCGCCAAAGGTGTATGAATCCTACTTGTACTATGAGAGGACTCTCAAATCAATAGATGATATAGTTGCTATGTTAGCATAG 576 0.5035 MSSFTHTTTLLHAHLKTKHHHTNPPPPSSSSSSSKPNRRKLVSSLLGSSIAALAVGAAAHGPPAAQAQSWGTRSFLREHFFEAGLSPEESAERIKQTAEGLHSMREMLENMSWRYVIFYIRLKQAYLDRDLKTAMATLPDYMRKDYVKVANELVDNMAELDRYVRSPKVYESYLYYERTLKSIDDIVAMLA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3006 191 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 60 191 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Sto6g3006 191 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 1 191 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Sto6g3006 191 MobiDBLite consensus disorder prediction 22 38 - -
Sto6g3006 191 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 2, CHLOROPLASTIC 1 191 - -
Sto6g3006 191 SUPERFAMILY Oxygen-evolving enhancer protein 3, 80 191 IPR023222 -
Sto6g3006 191 Gene3D - 51 191 IPR023222 -
Sto6g3006 191 MobiDBLite consensus disorder prediction 14 38 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3006 K08901 - gmx:100807480 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3006 6 37170243 37171632 Sto6g3006 6 37170243 37171632 ECH