Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3000 ATGGCCATGGAGGAATCGACCTCGCTTTTATGCAATTTAGGGGTTTTGGATACTCTTACTGACAGTTCCTTACAAGAAATCGCAGACAGCTACAATGGCTTCTGTGCCGCCACGCAAACCCTTCTCACCGGCGCCGGCGACCTCTCTGTTGGTCCCGAGTTCGCCGCTCACGTTCGCGGCCTCTGCAAAAATGGATTGGTGTCACTGGTTCGAGATCACTTTCTTCAAGTGATTGAGGAAACATTTGAGAGAAATGGAGCGTCGAAATTTTGGGGACGTTTTGATGCTTACAGTAATTTTGCGGATTTGAAGAAGGATAATGATGTCGACTTTGTGCAGAGGAAAAACTCCTTCAAAGCGCTAACTTATTCTACTTATAATTGGAGTCAAACTGTGCAGGCTGTGCCCCTGCAATTTCTACATGCCCTTCTTGTCTATCTTGGTGACTCTGTTAGTTATGAGAGTACTTCATCAGGTCTTAAATCACCTTTAGCAGCACGTCCATCTGCATGCTGTCCTGGAATTGATGCTCCATCTGAAGGGCTTGTTAGATGGAAGTTACGGCTGGAATATTTTGCTTATGAAACGCTACAAGATTTAAGAATAGCCAAACTGTTTGAGATAATTGTTGATTATCCTGAGAGCTCTCCTGCAATTGAAGACTTAAAATTATGTCTTGAATACACTGGGCAACATTCAAAGCTGGTGGAGTCATTTATTTCAGCACTACGTTACCGCTTGCTAACTGCAGGCGCATCGACCAATGATATTTTGCATCAATATGTTTCGACTATTAAAGCCTTAAGGACAATAGATCCTGCAGGTGTTTTTCTTGAGGCAGTTGGTGAGCCAATAAGGGACTATTTAAGAGGAAGGAAAGATACCATAAAATGCATAGTGACCATGCTTACAGATGGGACTAGTGGAAATTCAAGTGCTTCTGGAAATCCTGGAGATAGCCTTCTTGAAGAGTTGAACAGAGATGAAGAAATTCAAGAGAGTATTGGTGCAGATGATGACTTCAATACTGATGACAGGCAAGCATGGATCAATGCCACACGCTGGCAGCCAGACCCTGTGGAAGCAGATCCGTTAAAAGGTAGCAGGAACCAGAGGAAGGTTGACATACTTGGGATGATTGTAGGCATAATTGGTTCTAAAGACCAACTAGTTAATGAATATCGAACTATGCTTGCAGAAAAGCTTCTAAACAAATCTGATTATGATATTGACTCTGAGATACGTACTCTGGAACTCCTTAAGATACAATTTGGAGAGAGTAGCCTACAGAAATGTGAGATAATGCTCAATGATCTGATTGACTCAAAGAGGACTAATGCCAACATAAAAGCTACCATAAGTGCTGAGGTGGGAGAGAATGCAATATCAATGGATGTAGTTTCTGCCACTATCATATCTTCTAATTTCTGGCCTCCAATACAGGATGAGCAGGTTATACTGCCTGGACCTGTTGACCAGCTCCTTTCTGATTATGCAAATAGATTTCATGAAATCAAAACTCCCCGTAAGCTACAATGGAAGAAAAGTCTTGGGACCGTCAAACTGGAGTTGCAGTTTGAAGATAGGGCCATGCAATTCACTGTAGCTCCTGTTCATGCATCTATCATCATgcaatttcaagatcaaacgaGTTGGACCTCTAAAAACCTTGCAGCTGCTATTGGAGTACCTGTGGATGTATTGAATCGGAGGATACATTTCTGGATAAGCAAGGGGGTCATTGCAGAGTCTCCTGGAGCAGACTCCTCTGACCATGTATACACCCTTATGGAAAACATGGTTGACACAAGTAAGAATGGAGGCAGCAGTGGTAATCCCCAAGAACTTCTTGGAGGCGATGAGGAGGAAGAGAGATCGGTGGCCTCAGTGGAGAACCAATTACGTAAGGAAATGACTGTATATGAGAAATTTATCCTGGGGATGCTCACAAACTTCGGTAGCATGACACTAGAACGTATTCACAATACTCTCAAGATGTTTTGCATTGCTGACTCATCTTATGACAAGTCACTCCAACAGCTACAAAGCTTTTTATCTGGTCTAGTCTCCGAAGAGAAGTTAGAACACAGGGATGAAATGTACTTCCTGAAGAAGTAG 2118 0.424 MAMEESTSLLCNLGVLDTLTDSSLQEIADSYNGFCAATQTLLTGAGDLSVGPEFAAHVRGLCKNGLVSLVRDHFLQVIEETFERNGASKFWGRFDAYSNFADLKKDNDVDFVQRKNSFKALTYSTYNWSQTVQAVPLQFLHALLVYLGDSVSYESTSSGLKSPLAARPSACCPGIDAPSEGLVRWKLRLEYFAYETLQDLRIAKLFEIIVDYPESSPAIEDLKLCLEYTGQHSKLVESFISALRYRLLTAGASTNDILHQYVSTIKALRTIDPAGVFLEAVGEPIRDYLRGRKDTIKCIVTMLTDGTSGNSSASGNPGDSLLEELNRDEEIQESIGADDDFNTDDRQAWINATRWQPDPVEADPLKGSRNQRKVDILGMIVGIIGSKDQLVNEYRTMLAEKLLNKSDYDIDSEIRTLELLKIQFGESSLQKCEIMLNDLIDSKRTNANIKATISAEVGENAISMDVVSATIISSNFWPPIQDEQVILPGPVDQLLSDYANRFHEIKTPRKLQWKKSLGTVKLELQFEDRAMQFTVAPVHASIIMQFQDQTSWTSKNLAAAIGVPVDVLNRRIHFWISKGVIAESPGADSSDHVYTLMENMVDTSKNGGSSGNPQELLGGDEEEERSVASVENQLRKEMTVYEKFILGMLTNFGSMTLERIHNTLKMFCIADSSYDKSLQQLQSFLSGLVSEEKLEHRDEMYFLKK 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3000 705 SUPERFAMILY "Winged helix" DNA-binding domain 634 704 IPR036390 -
Sto6g3000 705 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 2 16 99 IPR044554 -
Sto6g3000 705 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 2 131 705 IPR044554 -
Sto6g3000 705 Gene3D Cullin; Chain C, Domain 2 464 606 - -
Sto6g3000 705 Gene3D - 620 705 IPR036388 -
Sto6g3000 705 SMART cul_2 375 526 IPR016158 -
Sto6g3000 705 MobiDBLite consensus disorder prediction 601 625 - -
Sto6g3000 705 SUPERFAMILY Cullin homology domain 354 600 IPR036317 -
Sto6g3000 705 ProSiteProfiles Cullin family profile. 379 576 IPR016158 -
Sto6g3000 705 PANTHER BNAC04G32030D PROTEIN 16 99 - -
Sto6g3000 705 PANTHER BNAC04G32030D PROTEIN 131 705 - -
Sto6g3000 705 Gene3D Cullin Repeats 356 456 - -
Sto6g3000 705 SMART APC2_2 644 703 IPR014786 -
Sto6g3000 705 Pfam Cullin family 373 575 IPR001373 GO:0006511|GO:0031625
Sto6g3000 705 Pfam Anaphase promoting complex (APC) subunit 2 644 701 IPR014786 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3000 K03349 - gmx:100785428 1006.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3000 6 37121550 37129264 Sto6g3000 6 37121550 37129264 ECH