Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2981 ATGAGCAAAGCTAGCTTCGAAGTGGAGTTCGAAACTCCGGTTACAGACGCCATTTCCAGAATCCGATTCGCTCCTCACTCCAACAATCTCCTTATATCTTCTTGGGACTCCATTCTTCGCCTATACGACGTTGAGAACTCCGTGCTTAGACTAGAAGCTCCATCTGAAGCCGCGCTTCTCGATTGTGTTTTCCAGGACGAGTTGGTCGCTTTTGCCGCGGCTTCTGATGGGTTAATCCGAagGTATGACTTGCATTCAGGAATTATCTATACAATGGGTAGTCACGATGACACAGCAACATGTACTGGGTACTGCAATGAATTGGGTGTGTTAATTACTTCTGGATTTGACAAGAAGATATTGTTGTGGGATATTCGTACGGGGAAGGTTCTTCATTGCTTGAGAAATCTAGGTTCAGAAGTGGACTCCATTTCTGTCTCAGGGTTCAATATGACTGTTGCCATTGGAACTTTTGTGCATATTTATGATTTGCGTCATTTTAACCAACCAGTTCAATCAAAGGAACCACACAAGGGCGCTCAAATAAGATGTGTTAGTTCAGTTCCTTATTCAGATGGATATGCAGTTGGATCAGTAGATGGTCGAGTAGCATTGCAGATCTCTTCATCCGGTTCAAACCACATTGGATATACATTCCGGTGTCATCCAAAATCAGAAGATGGAAGACATTATTTTTCATCGGTGAATGACATCATATTCAATCCGGTtGTTTCTGGTGCATTTGTCACTGGTGACAATGAAGGATATGTTACAATATGGGACGCTGGAAGTAGGAAAAGATTAATTGAGTTTCCTAAATACCCAAACAGTGTGGCATCCTTATCATACAACCATGAGGGACAGCTTTTGGCTGTGGCATCAAGCTATACATACCAAGAAGCAAGGGAAATGTAA 915 0.424 MSKASFEVEFETPVTDAISRIRFAPHSNNLLISSWDSILRLYDVENSVLRLEAPSEAALLDCVFQDELVAFAAASDGLIRRYDLHSGIIYTMGSHDDTATCTGYCNELGVLITSGFDKKILLWDIRTGKVLHCLRNLGSEVDSISVSGFNMTVAIGTFVHIYDLRHFNQPVQSKEPHKGAQIRCVSSVPYSDGYAVGSVDGRVALQISSSGSNHIGYTFRCHPKSEDGRHYFSSVNDIIFNPVVSGAFVTGDNEGYVTIWDAGSRKRLIEFPKYPNSVASLSYNHEGQLLAVASSYTYQEAREM 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2981 304 PANTHER MRNA EXPORT FACTOR AND BUB3 6 304 - -
Sto6g2981 304 SMART WD40_4 167 209 IPR001680 GO:0005515
Sto6g2981 304 SMART WD40_4 212 261 IPR001680 GO:0005515
Sto6g2981 304 SMART WD40_4 85 124 IPR001680 GO:0005515
Sto6g2981 304 SMART WD40_4 5 43 IPR001680 GO:0005515
Sto6g2981 304 SMART WD40_4 44 83 IPR001680 GO:0005515
Sto6g2981 304 ProSiteProfiles Trp-Asp (WD) repeats profile. 92 133 IPR001680 GO:0005515
Sto6g2981 304 PANTHER MITOTIC CHECKPOINT PROTEIN BUB3.3 6 304 - -
Sto6g2981 304 ProSitePatterns Trp-Asp (WD) repeats signature. 111 125 IPR019775 -
Sto6g2981 304 Gene3D - 2 304 IPR015943 GO:0005515
Sto6g2981 304 SUPERFAMILY WD40 repeat-like 14 295 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2981 Sto-Chr6 36944641 36947571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2981 110 295 Miscellaneous Gene Families AT5G08390 27.461 8.54e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2981 K02180 - gmx:112997601 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2981 6 36944641 36947571 Sto6g2981 6 36944641 36947571 ECH