Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2901 ATGGAGgatgagaaggaggagaagacaTACAGGAAGATGAAGTATATGGGAATGATGAATTCAGAAATAATAAAAGGATTATTATTTGGAGGGATTAAGGGGGTTTATGAGAATAATGGGTATCTAATGGTTTCTTCCAATGGAGGATTGAATCAAATGCGAGCTGGGATATGTGATATGGTTACAATTGCAAGATTTTTAAATGTGACATTAATAGTTCCTGAATTGGACAATACTTCCTTTTGGAATGACCATAGCCAATTTTCAGATATATTTGATGtggattatttaataaattccTTGAGAGATGAAGTTAAAATCCTCACAGAATTGCCTCCCAATGAGAAGAAAAAAGTGGAAACAGATTTTCTCTATTCCATGCCACCCATCAGTTGGTCTAACATGACATATTACTACAAAGTGATTCTTCCACGTTTAAAGTTATATGAAGTAGTGCACTTCACAAAGTCAGATGCTAGGCTTGCAAACAATGGGCTTCCAGAGGAAGTACAGAAGTTGAGATGCAGAGTGAACTATGAAGCTTTGAGATTTAAACCAGAAATTGAGAATGTGGCTAACAAGATTGTTAGAATTCTTAAAGAGAGAGGACCTTATTTGGCCCTTCATCTTAGATATGAAATGGACATGATTGCTTTCTCTGGCTGCAATGAAGGCTGCACTGACCAAGAGATTGATGACTTAACCAAAATGAGGTATGCATATCCATGgtggaaagagaaagagatagactcagagaagaagagaaaagatgGTCTATGTCCCCTAACTCCAGAAGAAACTGCTTTAACACTAAAAGCATTGGGAATTGACAGAAACATTCAAGTTTATATTGCTGCTGGAGACATTTATAAAGCAGACAAAAGAATGGAATCTCTCAAACAAGCTTTCCCAAATCTGGTGAAGAAGGAGACATTATTGGAAGAGTCAGAGCTTGGTCCTTTCAGAAACCATTCAAACCAAATGGCAGCAATTGATTACTATGTGTCCATAGAGAGTGACATATTTGTGCCCTCTTACAATGGTAACATGGCAAAGCTTGTTGAAGGCCATAGAAGGAAGACAATAGTGTTGGACAGAAAAGTGTTGGTGGAGGTAATAGACAATTACAAGAATGGGACAATTGGGTGGGACAAGTTCTGCACAAAAGTGAAGGAAGCTCATGCTGATCGAATGGGGAACCCTACAATGAGATCAGTGAGCAGAGCATCGTCGTCTTCGTCGTCTtggtcgtcgtcgtcgtcgtctttGTCGTCGTTATCATCACTCTCTAAGCACATATGGAAACACGATGTGTTTCTAAGTTACCGACACGACGACACCTTCGACTTCACTCACAAACTCTCCACCGCTCTCGAAGAAGCAGGTATAACTACCTTCAGCTTCCACAAGAACCTCTTCATGGGGTCCGACGCCCTCCCCGATCAACATTTGCTCAAAGAAATCGAAGAATCCCAACTCTACCTTGTTGTCTTCTCGACAAACTACGCTGCCTCGATTCGCTGCTTGGATGAACTCGCAACCATCGCCGGCTGCATCAAGGAACAGCGGCTCAGTGTCGTCACGGTTTTCTACGGTGTCGATCCGTCGGAGGTGCGGTGTAGTTGGTACGGAAAACACTTTGCTGAACACGAGGAGAAGTTCAGACTCAATTTAGTGAAGCTACGAAGATTGCGGCTAGCTAGAACATTCGTGGCCCGATGCCGAGGGTTGGTTGTACAGAATGGGATAGACCTGGAagttattgataaaattgttaAGAAGGCAATGGAAAAACTAGGCCATGATCATGTTCTAGTTGGGATACAATCTCGTTGTCTCCCAATGTTGAGAAGCTTGAACCTTCGTGGCTCTGAACGTCTAATGAAGATGCCAGATTTTGAGGGGCTTCCAAATCTTGAAAGGATGGACCTTGAAGGATGTACTTCACTATTGCAACTTCCTCCATCTGTTGCATTCCTTCCAAACCTCAAGCTCTTGAATTTGAGGAACTGTACAGGTCTTCTCAGTATCCCtaataaattgtttggcctaTCCTCTCTTGAAATCTTGAATCTTGCTGGCTGCTCACAGCTTGCGGAATGTTTAAGCTTTAACCACTCTTTCTCGCCTAAAGGCTTGATAAAAGAGAAACTACGTAGATTTCACTTTCCTCGTCCTTTCTTTGCAAAATAA 2193 0.3926 MEDEKEEKTYRKMKYMGMMNSEIIKGLLFGGIKGVYENNGYLMVSSNGGLNQMRAGICDMVTIARFLNVTLIVPELDNTSFWNDHSQFSDIFDVDYLINSLRDEVKILTELPPNEKKKVETDFLYSMPPISWSNMTYYYKVILPRLKLYEVVHFTKSDARLANNGLPEEVQKLRCRVNYEALRFKPEIENVANKIVRILKERGPYLALHLRYEMDMIAFSGCNEGCTDQEIDDLTKMRYAYPWWKEKEIDSEKKRKDGLCPLTPEETALTLKALGIDRNIQVYIAAGDIYKADKRMESLKQAFPNLVKKETLLEESELGPFRNHSNQMAAIDYYVSIESDIFVPSYNGNMAKLVEGHRRKTIVLDRKVLVEVIDNYKNGTIGWDKFCTKVKEAHADRMGNPTMRSVSRASSSSSSWSSSSSSLSSLSSLSKHIWKHDVFLSYRHDDTFDFTHKLSTALEEAGITTFSFHKNLFMGSDALPDQHLLKEIEESQLYLVVFSTNYAASIRCLDELATIAGCIKEQRLSVVTVFYGVDPSEVRCSWYGKHFAEHEEKFRLNLVKLRRLRLARTFVARCRGLVVQNGIDLEVIDKIVKKAMEKLGHDHVLVGIQSRCLPMLRSLNLRGSERLMKMPDFEGLPNLERMDLEGCTSLLQLPPSVAFLPNLKLLNLRNCTGLLSIPNKLFGLSSLEILNLAGCSQLAECLSFNHSFSPKGLIKEKLRRFHFPRPFFAK 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2901 730 Gene3D - 430 603 IPR035897 -
Sto6g2901 730 CDD O-FucT_plant 41 359 IPR024709 -
Sto6g2901 730 SMART till_3 435 574 IPR000157 GO:0007165
Sto6g2901 730 PANTHER O-FUCOSYLTRANSFERASE FAMILY PROTEIN 34 406 - -
Sto6g2901 730 MobiDBLite consensus disorder prediction 403 421 - -
Sto6g2901 730 Pfam TIR domain 435 554 IPR000157 GO:0007165
Sto6g2901 730 Gene3D Ribonuclease Inhibitor 604 717 IPR032675 -
Sto6g2901 730 SUPERFAMILY Toll/Interleukin receptor TIR domain 426 574 IPR035897 -
Sto6g2901 730 ProSiteProfiles TIR domain profile. 434 599 IPR000157 GO:0007165
Sto6g2901 730 MobiDBLite consensus disorder prediction 398 421 - -
Sto6g2901 730 Pfam GDP-fucose protein O-fucosyltransferase 41 359 IPR019378 -
Sto6g2901 730 SUPERFAMILY RNI-like 602 704 - -
Sto6g2901 730 PANTHER OS02G0726500 PROTEIN-RELATED 34 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2901 Sto-Chr6 36206853 36216801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2901 37 404 Miscellaneous Gene Families AT2G37980 47.326 9.52e-116 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2901 K23280 - gmx:100780054 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2901 6 36206853 36216801 Sto6g2901 6 36206853 36216801 ECH