Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2881 ATGTCTAGTTTGGTTATGAGTTGCCGAATTGAGAAGGCTGATCGCGACATGCCCGTGGACCTTATCAGTGACCTGCCAAGGAATGTAATTGATTGCATCTTAAGGCACTTGCCCATCCGGGATTTAGTAAGGACTAGTATTCTGTCAAGGAAATGGAGGTATATGTGGCTTACAGTACCAAGTATTGAGTTTGATCATATCTTTTTCAAAAATATCCTAACTGGTGGTGGGCATCTTAAAGACCATGAAATTCCTAGTGTAATCACGGAAGTTCTTTTTCTACATGATGGCCCATTAGAGAAGTTTTATCTTGTCATCCCTCACAACTACCCTACTAGAGTCAGATGCCTCAGTCAGTGGATTCTGTATTTGTCAAGAAGTGGCATTAAAGAACTTGAGCTTAAAAATTGTCAGGAAGAGCCCTATAAAATGCCATCTCATCTCTTCTCATGCCTGCACTTGAATTACTTGGGACTTGGCAACTTCACACTGAGGCCTCCACCTGATTTTGGTGGATTTAAAAGTTTGATTGGCCTTAACATGTGTAATGTCATAATTGAATCAAACATACTTGAGAGTTTTATCTCTAGTTGTCCATTACTAGAAGAGCTGACAATTTCATACTGTTTTGGTTTTGATTCTCTGAATATCTCTTCTCCCAATCTCCGCATCTTACTCATAGAAGGAAGTGGGGTTTTGAAGTCAATTTGTctgaagaaattaaataatcttGTGGATCTGACAATTATACTTGAAAGATCTATGGAGAACTTAGATGGAGGCAGAAGATCCAATTTGGTTGACTTCTTCTCATCCTTGCCAAACATTGAGAAGCTTCGTTTGGTAGACGGTTACATTAAGTTTTTGTCCACAGGTAGCATTCAAGAGAAACTTTCGATGATGATATACTCCTTAAAACATTTGGTATTGCATGAAATTTCTTTCACTGAACGAGGCCAGATTTCACTGCTTGTTTGCTTACTTAAAAGTTCTCCTAACTTGGTGGAATTTGAAATAACGATCCATAATCTGGAGCCGGGACCGATTTACCGCATTGGAGAGTTTATCTGGAATGGCTACTCCCTCAATCGGCTTAGGACTGTGAATATTAGAGTTAATACCATCTTTCATGGAGCAGTGGATTTAGCAGAATATCTTCTAAAATATTCACCAGTGTTGGAGATTCTTACGTTCAAGATTGATGGAGAACAATCAGATGCTGGTGAAGTTTTAGGAGTTACACAAGATTTGTTACAGATAAGAAGGAAGTCACCAAAAGCAGAAGTTATTTTCCTTTGTGATGGCTTCTTCTAA 1314 0.3836 MSSLVMSCRIEKADRDMPVDLISDLPRNVIDCILRHLPIRDLVRTSILSRKWRYMWLTVPSIEFDHIFFKNILTGGGHLKDHEIPSVITEVLFLHDGPLEKFYLVIPHNYPTRVRCLSQWILYLSRSGIKELELKNCQEEPYKMPSHLFSCLHLNYLGLGNFTLRPPPDFGGFKSLIGLNMCNVIIESNILESFISSCPLLEELTISYCFGFDSLNISSPNLRILLIEGSGVLKSICLKKLNNLVDLTIILERSMENLDGGRRSNLVDFFSSLPNIEKLRLVDGYIKFLSTGSIQEKLSMMIYSLKHLVLHEISFTERGQISLLVCLLKSSPNLVEFEITIHNLEPGPIYRIGEFIWNGYSLNRLRTVNIRVNTIFHGAVDLAEYLLKYSPVLEILTFKIDGEQSDAGEVLGVTQDLLQIRRKSPKAEVIFLCDGFF 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2881 437 SUPERFAMILY RNI-like 106 398 - -
Sto6g2881 437 PANTHER - 9 399 - -
Sto6g2881 437 SMART fbox_2 25 66 IPR001810 GO:0005515
Sto6g2881 437 Gene3D Ribonuclease Inhibitor 105 392 IPR032675 -
Sto6g2881 437 PANTHER F-BOX PROTEIN-LIKE 9 399 - -
Sto6g2881 437 SUPERFAMILY F-box domain 17 69 IPR036047 GO:0005515
Sto6g2881 437 Gene3D - 6 59 - -
Sto6g2881 437 Pfam F-box domain 22 56 IPR001810 GO:0005515
Sto6g2881 437 ProSiteProfiles F-box domain profile. 19 72 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2881 Sto-Chr6 35998825 36000851 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2881 20 225 EF-hand Containing Proteins AT5G41840 26.293 1.17e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2881 - - ccaj:109791275 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2881 6 35998825 36000851 Sto6g2881 6 35998825 36000851 ECH