Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2879 ATGATGAAGGCTGATCATGACATGCCTGTGGACCTTATCAGTGAACTGCCAAGGAATGTAATTGATCACATCTTAGAGATCTTGCCCATCCGAGATGCAGTGAGGACCAGTATTCTGTCAAGGAAATGGAAGAACATGTGGCTTACGGTACCAAGACTTGAGTTTGCTGATAGCTTTTTTGAAATTCCTCAAGGCCATGAAATTCCAAGGGTAATCACAGAAATTCTTTTGCAACATGATGGCCTATTAGAGCAGTTTATTCTGTGCATCCCTCGTGAGTACCCTACCAGAGTCAGATGCCTCAGTCTGTGGATTCGGTATTTATCAAGAAGTGGCATTAGGGATCTTATGCTTGTAAATGATCAGCCAGACCCCTATGAAATTCCATCACATCTCTTCTCATGTCTAAACTTGGCTTACTTGGATATTACCAACTTTGCAATGAAGCCTCCACCACCTGATTTTGGCGGGTTTAAAAGTTTGACTGGCCTTCACATGTTTAGTATCAGAATTGAATCAGACGTGCTTGAAAGTCTCATCTCAGGTTGTCCATTACTAGTGAACCTGTCAATTTCAGGCTGTATTGGTTTTGATTGTCTTAGTATTTCTGCTCCCAATCTCCAAGTCTTAGTGATACTTGACCATCGGGCTTTCAAGTCAATTTgtcttaaaaatttaaagaatttggTGGATCTGAATATTATACTTAATGGACATATGGAGGACTTAGAGGGAGGCAGAAGATCCAATTTGGTTGACTACTTCTCATCCTTGCCAAAAGTTGAGAAGCTTCATTTGGCAGGCAGTTACATTACGTTTTTGTCCTTAGGTTACATTCCAGAGACACTTCCAAACATGATCTACTCCTTAAAACATCTGCAATTGTGTGGAATTTCTTTCAATAATCCAAGACACATTTCACTACTTGTTTGCTTACTTAAAAGTTCTCCTAACTTGGTGGAATTTGACGTCAAGATCAGTAATCTGGAGTCGCTACCAGTTTTTAGCTGTTTTGGAGAACCAGTCTCCAATTTCTGCTCCTTCAATCAGCTTAGGACCGTGTTTATTATAGTTGATACCATCTTTGAGCCAGCAGTGGGTTTAGCAAAATATATACTAGCAAATTCACCATTGTTGGAGATTCTTAGTTTCATGATTGATCACAAACAATCAGATGCTGCTGAGTGTGAAGCCTCCCACTTCTCTGCAAGGCCATCTCCTTCAAGCATTCTAACCACTTCAGACATCTTGGGTCTATTGCTTGGAAGTGCTCTTCTCCCAGAGATGAGTTCAAGCAAGAGGATTCCAAAGCCAAAGACATCTGTTTTATCAGAGGACTGTCCCGTGGAGAGGTACTCTGGGGCTATGTGCCCTACAGTCCCTCTCACAGCTGTTGTGACATGTGACTCCCAAGGCTATCCTCTTCCTTGTGGGCCAATCCAGAGGCGGCTTCGCCTTGAGACGGGAAGCGACGCTTCCGTTGGACATGTAGGGATACACCAAGAGCCTCTCGGTGGGAGTGATGCAGAAGCCGTAGAGACGAAGGAGGTTCCGGTGCACGGCGAGGCTTATCATCTCCACTTCAGTCTGGAACTGAGTCTCTCCACCTCCTCCATTGATGGAACTTGCTGCTATGTCTTTGAGCCTTTTCACTGCTATGACTCCTCCTCCTTCTGGTAG 1680 0.4327 MMKADHDMPVDLISELPRNVIDHILEILPIRDAVRTSILSRKWKNMWLTVPRLEFADSFFEIPQGHEIPRVITEILLQHDGLLEQFILCIPREYPTRVRCLSLWIRYLSRSGIRDLMLVNDQPDPYEIPSHLFSCLNLAYLDITNFAMKPPPPDFGGFKSLTGLHMFSIRIESDVLESLISGCPLLVNLSISGCIGFDCLSISAPNLQVLVILDHRAFKSICLKNLKNLVDLNIILNGHMEDLEGGRRSNLVDYFSSLPKVEKLHLAGSYITFLSLGYIPETLPNMIYSLKHLQLCGISFNNPRHISLLVCLLKSSPNLVEFDVKISNLESLPVFSCFGEPVSNFCSFNQLRTVFIIVDTIFEPAVGLAKYILANSPLLEILSFMIDHKQSDAAECEASHFSARPSPSSILTTSDILGLLLGSALLPEMSSSKRIPKPKTSVLSEDCPVERYSGAMCPTVPLTAVVTCDSQGYPLPCGPIQRRLRLETGSDASVGHVGIHQEPLGGSDAEAVETKEVPVHGEAYHLHFSLELSLSTSSIDGTCCYVFEPFHCYDSSSFW 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2879 559 Pfam F-box domain 13 48 IPR001810 GO:0005515
Sto6g2879 559 ProSiteProfiles F-box domain profile. 10 46 IPR001810 GO:0005515
Sto6g2879 559 SUPERFAMILY F-box domain 8 55 IPR036047 GO:0005515
Sto6g2879 559 Gene3D - 1 50 - -
Sto6g2879 559 PANTHER CYCLIN-LIKE F-BOX 6 392 - -
Sto6g2879 559 Gene3D Ribonuclease Inhibitor 96 363 IPR032675 -
Sto6g2879 559 SUPERFAMILY RNI-like 111 353 - -
Sto6g2879 559 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 6 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2879 Sto-Chr6 35990470 35995372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2879 11 210 EF-hand Containing Proteins AT5G41840 27.074 7.84e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2879 - - lang:109353600 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2879 6 35990470 35995372 Sto6g2879 6 35990470 35995372 ECH